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13_2_20cm_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_540_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

238..1227
DNA (990bp) protein (330aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein id=14428720 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_540_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1528..2952
DNA (1425bp) protein (475aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILH5_KORVE
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABF42275.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
13_2_20cm_scaffold_540_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2962..4815
DNA (1854bp) protein (618aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; C
Multi-sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILH4_KORVE
multi-sensor signal transduction histidine kinase
13_2_20cm_scaffold_540_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

4818..5411
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:CBE68928.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_scaffold_540_5
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5513..6652
DNA (1140bp) protein (380aa)
thiO; glycine oxidase ThiO (EC:1.4.3.19)
Glycine oxidase ThiO protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SUI5_9DELT
Glycine oxidase ThiO protein {ECO:0000313|EMBL:ERK92400.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="M
13_2_20cm_scaffold_540_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6707..7579)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C418C
hypothetical protein; K03195 type IV secretion system protein VirB10 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_540_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7862..8665)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C418C
hypothetical protein; K03195 type IV secretion system protein VirB10 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_540_8

Not on your lists

8805..9005
DNA (201bp) protein (67aa)
allantoinase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372C8B6
Mandelate racemase/muconate lactonizing enzyme,N-terminal domain protein {ECO:0000313|EMBL:CBI00643.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="min
allantoinase
13_2_20cm_scaffold_540_9
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9034..9348)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKA4_KORVE
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
13_2_20cm_scaffold_540_10
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9351..10112)
DNA (762bp) protein (254aa)
Polysaccharide deacetylase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NV41_GRAMM
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEU35330.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella ma
13_2_20cm_scaffold_540_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10561..11679
DNA (1119bp) protein (373aa)
Tfp pilus assembly protein PilF n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQS8_SINAD
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Tfp pilus assembly protein PilF
13_2_20cm_scaffold_540_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

11663..12880
DNA (1218bp) protein (406aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Putative Deoxyhypusine monooxygenase id=2233802 bin=GWB2_Proteobacteria_55_19 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PBS lyase
13_2_20cm_scaffold_540_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12877..14289
DNA (1413bp) protein (471aa)
UPI0003CE2D66 related cluster n=1 Tax=unknown RepID=UPI0003CE2D66
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
glycosyl transferase family 2
13_2_20cm_scaffold_540_14
unknown

Not on your lists

14367..15011
DNA (645bp) protein (215aa)

This feature has no annotations

13_2_20cm_scaffold_540_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15028..15696)
DNA (669bp) protein (223aa)
Phage shock protein A, PspA n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XT6_SOLUE
phage shock protein PspA
Phage shock protein A, PspA {ECO:0000313|EMBL:ABJ85529.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usi
13_2_20cm_scaffold_540_16
unknown

Not on your lists

comp(15744..15989)
DNA (246bp) protein (82aa)

This feature has no annotations

13_2_20cm_scaffold_540_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16039..18084)
DNA (2046bp) protein (682aa)
Flotillin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRU6_KORVE
flotillin
Flotillin {ECO:0000313|EMBL:ABF40404.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_2_20cm_scaffold_540_18
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18199..18729)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037F416A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35094.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_2_20cm_scaffold_540_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18900..20291)
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NK3_SOLUE
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABJ88767.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Cand
13_2_20cm_scaffold_540_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(20313..22175)
DNA (1863bp) protein (621aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibact
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NK2_SOLUE
integral membrane sensor signal transduction histidine kinase
13_2_20cm_scaffold_540_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22530..23897)
DNA (1368bp) protein (456aa)
SPFH domain, Band 7 family protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQW9_KORVE
hypothetical protein
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:ABF40731.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source
13_2_20cm_scaffold_540_22
unknown

Not on your lists

comp(24048..24245)
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_scaffold_540_23
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

24443..25630
DNA (1188bp) protein (396aa)
peptidase M50 Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
sti:Sthe_0724 CBS domain containing protein id=1241382 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
peptidase M50
13_2_20cm_scaffold_540_24
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25658..26230)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3BXK4_STRMB
Uncharacterized protein {ECO:0000313|EMBL:GAJ82345.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein
13_2_20cm_scaffold_540_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(26406..27398)
DNA (993bp) protein (331aa)
Aldo/keto reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYI7_9BACT
Aldo/keto reductase {ECO:0000313|EMBL:EDY20528.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
aldo/keto reductase
13_2_20cm_scaffold_540_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

27684..29753
DNA (2070bp) protein (690aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037B240D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85352.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_540_27
unknown

Not on your lists

29782..30048
DNA (267bp) protein (89aa)

This feature has no annotations

13_2_20cm_scaffold_540_28
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(30165..32042)
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L877_9BACT
fibronectin, type III
hypothetical protein Tax=RBG_13_Chloroflexi_52_14_curated
13_2_20cm_scaffold_540_29
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32684..35740)
DNA (3057bp) protein (1019aa)
NHL repeat containing protein id=2117513 bin=GWD2_Desulfuromonadales_54_10 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
NHL repeat-containing protein Tax=GWD2_Desulfuromonadales_54_10_curated
NHL repeat-containing protein
13_2_20cm_scaffold_540_30
unknown

Not on your lists

comp(35746..36183)
DNA (438bp) protein (146aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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