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13_2_20cm_scaffold_714

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_714_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

1..666
DNA (666bp) protein (222aa)
Metal dependent phosphohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB4_KORVE
metal dependent phosphohydrolase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
metal dependent phosphohydrolase
13_2_20cm_scaffold_714_2
unknown

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680..895
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_714_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

974..1939
DNA (966bp) protein (322aa)
cell division protein FtsY n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371D203
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibac
13_2_20cm_scaffold_714_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1967..3076
DNA (1110bp) protein (370aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB2_KORVE
5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylami
5-amino-6-(5-phosphoribosylamino)uracil reductase
13_2_20cm_scaffold_714_5
unknown

Not on your lists

3073..3456
DNA (384bp) protein (128aa)

This feature has no annotations

13_2_20cm_scaffold_714_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3510..4511)
DNA (1002bp) protein (334aa)
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:CDM64523.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDM64523.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
zinc-binding alcohol dehydrogenase family protein (EC:1.1.1.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379060A
13_2_20cm_scaffold_714_7
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4619..5281
DNA (663bp) protein (221aa)
ial:IALB_2405 ribE; Riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] id=719659 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDB90116.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="C
13_2_20cm_scaffold_714_8
unknown

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comp(5298..5699)
DNA (402bp) protein (134aa)

This feature has no annotations

13_2_20cm_scaffold_714_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5784..7220)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F1A0A rbh
Amino acid permease {ECO:0000313|EMBL:GAO56766.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
amino acid permease
13_2_20cm_scaffold_714_10
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7217..7993)
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0B4_TERSS
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ABC transporter-like protein
13_2_20cm_scaffold_714_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(7990..8637)
DNA (648bp) protein (216aa)
molybdopterin-guanine dinucleotide biosynthesis protein; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IML2_KORVE
molybdenum cofactor guanylyltransferase
13_2_20cm_scaffold_714_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8674..10074)
DNA (1401bp) protein (467aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A837_THEID
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM64893.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
Fis family two component sigma-54 specific transcriptional regulator
13_2_20cm_scaffold_714_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10087..12084)
DNA (1998bp) protein (666aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
Similar to histidine kinase protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZ69_9BACT
signal transduction histidine kinase, nitrogen specific, NtrB
13_2_20cm_scaffold_714_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12352..12672
DNA (321bp) protein (107aa)
10 kDa chaperonin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG61_CHLTF
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=454194 speci
Co-chaperonin GroES (HSP10)
13_2_20cm_scaffold_714_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13249..14394
DNA (1146bp) protein (382aa)
60 kDa chaperonin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CH60_KORVE
groEL; chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
groEL; molecular chaperone GroEL
13_2_20cm_scaffold_714_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14567..15193
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILW9_KORVE
hypothetical protein; K07220 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_714_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15197..16192
DNA (996bp) protein (332aa)
Phosphate/sulfate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
phosphate transporter; K03306 inorganic phosphate transporter, PiT family id=12555365 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate transporter
13_2_20cm_scaffold_714_18
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16417..17745
DNA (1329bp) protein (443aa)
Oxidoreductase domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R589_ISOPI rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADV63842.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" sourc
13_2_20cm_scaffold_714_19
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17804..22270)
DNA (4467bp) protein (1489aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003817FD2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
NHL repeat containing protein
13_2_20cm_scaffold_714_20
unknown

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comp(22273..22713)
DNA (441bp) protein (147aa)

This feature has no annotations

13_2_20cm_scaffold_714_21
unknown

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comp(23172..23294)
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_scaffold_714_22
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23291..23611)
DNA (321bp) protein (107aa)
Tax=RBG_16_Acidobacteria_70_10_curated
13_2_20cm_scaffold_714_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

24305..25486
DNA (1182bp) protein (394aa)
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_02_FULL_Acid
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILV9_KORVE
GTP cyclohydrolase II
13_2_20cm_scaffold_714_24
Neisseria meningitidis, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25628..25996)
DNA (369bp) protein (123aa)
Putative DNA transport competence protein n=2 Tax=Neisseria meningitidis RepID=A1KR89_NEIMF
competence protein comEA
Competence ComEA helix-hairpin-helix repeat region domain protein {ECO:0000313|EMBL:EOC15554.1}; TaxID=1145157 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neiss
13_2_20cm_scaffold_714_25
unknown

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comp(25978..26370)
DNA (393bp) protein (131aa)

This feature has no annotations

13_2_20cm_scaffold_714_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26375..27748)
DNA (1374bp) protein (458aa)
Peptidase M16 domain protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSJ2_CHLT3
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66641.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16 domain protein
13_2_20cm_scaffold_714_27
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27748..29073)
DNA (1326bp) protein (442aa)
M16 family peptidase (EC:3.4.24.-)
Putative peptidase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S8A6_9DELT
Putative peptidase {ECO:0000313|EMBL:ERK92016.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
13_2_20cm_scaffold_714_28
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(29070..29966)
DNA (897bp) protein (299aa)
hypothetical protein id=16849700 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
hypothetical protein
13_2_20cm_scaffold_714_29
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(30039..30662)
DNA (624bp) protein (208aa)
UvrABC system protein B n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SR6_SOLUE
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
excinuclease ABC subunit B
Displaying 29 items

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