ggKbase home page

13_2_20cm_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 116 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_97_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(169..1281)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E78FA rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY16616.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_97_2
unknown

Not on your lists

comp(1357..1584)
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_scaffold_97_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1659..2870)
DNA (1212bp) protein (404aa)
ABC-type Na+ efflux pump, permease component n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTM7_OPITP rbh
Na+ ABC efflux pump permease
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:ACB74813.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (str
13_2_20cm_scaffold_97_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2872..3627)
DNA (756bp) protein (252aa)
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTM6_OPITP
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACB74812.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
13_2_20cm_scaffold_97_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

4656..5519
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000377C8D7
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
secretion protein HlyD
13_2_20cm_scaffold_97_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5512..6504
DNA (993bp) protein (331aa)
TPR repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQM0_KORVE
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABF40830.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_2_20cm_scaffold_97_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6550..7695
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F68C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83848.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_97_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

7798..9150
DNA (1353bp) protein (451aa)
Outer membrane efflux protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQM1_KORVE
outer membrane efflux protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
outer membrane efflux protein
13_2_20cm_scaffold_97_9
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

9171..10565
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000347ACAE rbh
PLP-dependent enzyme, glutamate decarboxylase Tax=RBG_16_Chloroflexi_48_8_curated
PLP-dependent enzyme, glutamate decarboxylase
13_2_20cm_scaffold_97_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10768..12270
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003457B6E rbh
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hopanoid biosynthesis associated radical SAM protein HpnJ
13_2_20cm_scaffold_97_11
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12360..12707
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5W0_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO31405.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_2_20cm_scaffold_97_12
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12707..13075
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMZ5_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK18797.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntro
13_2_20cm_scaffold_97_13
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13298..14533
DNA (1236bp) protein (412aa)
glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase, group 2 family {ECO:0000313|EMBL:ACO31903.1}; EC=2.4.1.- {ECO:0000313|EMBL:ACO31903.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acido
Glycosyl transferase, group 2 family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F415_ACIC5
13_2_20cm_scaffold_97_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14627..15829
DNA (1203bp) protein (401aa)
glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase, group 2 family {ECO:0000313|EMBL:ACO31903.1}; EC=2.4.1.- {ECO:0000313|EMBL:ACO31903.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acido
Glycosyl transferase, group 2 family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F415_ACIC5
13_2_20cm_scaffold_97_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

16479..16652
DNA (174bp) protein (58aa)
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_2_20cm_scaffold_97_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16673..17275
DNA (603bp) protein (201aa)
Glucan 1,4-beta-glucosidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8X3_PHEZH
glucan 1,4-beta-glucosidase
Glucan 1,4-beta-glucosidase {ECO:0000313|EMBL:ACG79338.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenyloba
13_2_20cm_scaffold_97_17
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17360..18439)
DNA (1080bp) protein (360aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Desulfovibrio africanus PCS RepID=M5PVG4_DESAF
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:EMG38044.1}; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrio
ABC transporter-like protein
13_2_20cm_scaffold_97_18
GWC2_Elusimicrobia_61_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18417..18974)
DNA (558bp) protein (186aa)
ABC transporter ATP-binding protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B70D66
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial Tax=GWC2_Elusimicrobia_61_19_curated
lipid A export permease/ATP-binding protein MsbA
13_2_20cm_scaffold_97_19
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19311..19760)
DNA (450bp) protein (150aa)
Putative AraC-type DNA-binding transcriptional regulator n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2U4_9PROT
putative AraC-type DNA-binding transcriptional regulator
Putative AraC-type DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDK99840.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magne
13_2_20cm_scaffold_97_20
unknown

Not on your lists

comp(19911..20225)
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_scaffold_97_21
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20539..21834)
DNA (1296bp) protein (432aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TWT6_9FIRM rbh
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AJQ28605.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermenta
13_2_20cm_scaffold_97_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22203..22958)
DNA (756bp) protein (252aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_2_20cm_scaffold_97_23
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22955..25471)
DNA (2517bp) protein (839aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=14627888 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_2_20cm_scaffold_97_24
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25511..25978)
DNA (468bp) protein (156aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
(2Fe-2S)-binding domain protein id=4915859 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_2_20cm_scaffold_97_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26033..26764)
DNA (732bp) protein (244aa)
TetR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transcriptional regulator, TetR family id=4840564 bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TetR family transcriptional regulator
13_2_20cm_scaffold_97_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(26922..27737)
DNA (816bp) protein (272aa)
Amidohydrolase 2 n=1 Tax=mine drainage metagenome RepID=T1BXN0_9ZZZZ
amidohydrolase; K07045 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
amidohydrolase 2
13_2_20cm_scaffold_97_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27814..29238)
DNA (1425bp) protein (475aa)
boxB; benzoyl-CoA oxygenase component B; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
benzoyl-CoA oxygenase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002FC0CF4
boxB; benzoyl-CoA oxygenase component B
13_2_20cm_scaffold_97_28
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29277..30959)
DNA (1683bp) protein (561aa)
Benzoyl-CoA-dihydrodiol lyase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q0J3_9RHOO rbh
boXC; benzoyl-CoA-dihydrodiol lyase Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
boXC; benzoyl-CoA-dihydrodiol lyase
13_2_20cm_scaffold_97_29
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30969..31880)
DNA (912bp) protein (304aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=62928 species="Bacteria; Proteobacteria; Betaprot
Shikimate kinase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KA16_AZOSB
anaerobic benzoate catabolism transcriptional regulator
13_2_20cm_scaffold_97_30
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32171..33748
DNA (1578bp) protein (526aa)
Aldehyde dehydrogenase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P4T6_AROAE rbh
boxZ; aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CAI07676.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (s
Displaying items 1-30 of 116 in total

View Taxonomy