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13_2_20cm_scaffold_2432

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2432_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..175)
DNA (174bp) protein (58aa)
carbohydrate kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_2432_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(172..987)
DNA (816bp) protein (272aa)
hypothetical protein; K06990 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4042392 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
13_2_20cm_scaffold_2432_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1179..1571)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
13_2_20cm_scaffold_2432_4
bacterium UASB270, Bacteria

Not on your lists

comp(1568..3922)
DNA (2355bp) protein (785aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=14428721 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
ATP-dependent protease La (EC:3.4.21.53)
13_2_20cm_scaffold_2432_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4373..5653)
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycine-serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VM08_CLOSH
13_2_20cm_scaffold_2432_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5646..6092)
DNA (447bp) protein (149aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Ribose-5-phosphate isomerase B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X6_GEMAT
13_2_20cm_scaffold_2432_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6031..7200)
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT rbh
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_scaffold_2432_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7184..8032)
DNA (849bp) protein (283aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG94_RHOM4
3-hydroxybutyryl-CoA dehydrogenase
13_2_20cm_scaffold_2432_9
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8029..8892)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000367248F
Putative metal-dependent membrane protease {ECO:0000313|EMBL:KIG17919.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;
abortive infection protein
13_2_20cm_scaffold_2432_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8889..9452)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZF11_TERRK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_2432_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9452..10642)
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
acetyl-CoA acetyltransferase
13_2_20cm_scaffold_2432_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10739..12694)
DNA (1956bp) protein (652aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W7_GEMAT
13_2_20cm_scaffold_2432_13
unknown

Not on your lists

comp(12699..12863)
DNA (165bp) protein (55aa)

This feature has no annotations

13_2_20cm_scaffold_2432_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


13418..15589
DNA (2172bp) protein (724aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT
Valyl-tRNA synthetase
13_2_20cm_scaffold_2432_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15752..16819
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_2432_16
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

16816..17208
DNA (393bp) protein (131aa)
selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RBG_16_Chloroflexi_68_14_curated
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SH32_9DELT
selA; L-seryl-tRNA(Sec) selenium transferase
Displaying 16 items

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