ggKbase home page

13_2_20cm_scaffold_3909

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3909_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(2..1924)
DNA (1923bp) protein (641aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D2_GEMAT
Alanine-tRNA ligase, eukaryota/bacteria
13_2_20cm_scaffold_3909_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1921..2580)
DNA (660bp) protein (220aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
alanyl-tRNA synthetase (EC:6.1.1.7)
alanyl-tRNA synthetase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B33F89
13_2_20cm_scaffold_3909_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2677..3321)
DNA (645bp) protein (215aa)
Regulatory protein RecX n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLM0_SORCE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_3909_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(3322..4401)
DNA (1080bp) protein (360aa)
Protein RecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D4_GEMAT rbh
recA; RecA protein; K03553 recombination protein RecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
recA; RecA protein
13_2_20cm_scaffold_3909_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4451..4843)
DNA (393bp) protein (131aa)
UPF0102 protein GAU_1918 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D5_GEMAT
hypothetical protein; K07460 putative endonuclease Tax=RBG_16_Gemmatimonadetes_66_8_curated
UPF0102 protein yraN
13_2_20cm_scaffold_3909_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4950..7157)
DNA (2208bp) protein (736aa)
Cell division protein FtsK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D8_GEMAT rbh
ftsK; cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ftsK; cell division protein FtsK
13_2_20cm_scaffold_3909_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7154..7873)
DNA (720bp) protein (240aa)
2-phosphosulfolactate phosphatase (EC:3.1.3.71); K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Probable 2-phosphosulfolactate phosphatase n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BHJ1_THEXL
2-phosphosulfolactate phosphatase
13_2_20cm_scaffold_3909_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7870..8133)
DNA (264bp) protein (88aa)
accC; acetyl-CoA carboxylase biotin carboxylase (EC:6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E0_GEMAT
acetyl-CoA carboxylase, biotin carboxylase
13_2_20cm_scaffold_3909_9
unknown

Not on your lists

8725..8952
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_scaffold_3909_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9194..9754)
DNA (561bp) protein (187aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E1_GEMAT
pilT; twitching mobility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pilT; twitching mobility protein
13_2_20cm_scaffold_3909_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9717..10292)
DNA (576bp) protein (192aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E1_GEMAT
pilT; twitching mobility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pilT; twitching mobility protein
13_2_20cm_scaffold_3909_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10285..10725)
DNA (441bp) protein (147aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DH34_THETG
biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
acetyl-CoA carboxylase, biotin carboxyl carrier protein
13_2_20cm_scaffold_3909_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10738..11832)
DNA (1095bp) protein (365aa)
Putative Xaa-Pro dipeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E3_GEMAT
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AHG91072.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3909_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11822..12268)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RBG_16_Nitrospirae_64_22_curated
3-dehydroquinate dehydratase n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z0P3_9SYNE
3-dehydroquinate dehydratase
13_2_20cm_scaffold_3909_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12268..13950)
DNA (1683bp) protein (561aa)
Tetratricopeptide repeat-containing protein
Tetratricopeptide repeat-containing protein {ECO:0000313|EMBL:AHG91074.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=7200674 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_2_20cm_scaffold_3909_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14098..15219
DNA (1122bp) protein (374aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E6_GEMAT
PpiC-type peptidyl-prolyl cis-trans isomerase
Displaying 16 items

View Taxonomy