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13_2_20cm_scaffold_5725

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5725_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..343)
DNA (342bp) protein (114aa)
Uncharacterised conserved protein UCP016719 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020P1_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_5725_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

425..2086
DNA (1662bp) protein (554aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
13_2_20cm_scaffold_5725_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2083..3327
DNA (1245bp) protein (415aa)
Beta-lactamase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A965_GEMAT
beta-lactamase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
beta-lactamase family protein
13_2_20cm_scaffold_5725_4
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3511..5205)
DNA (1695bp) protein (565aa)
Na+/solute symporter n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QG00_9CYAN
Na+/solute symporter Tax=RBG_16_Ignavibacteria_35_7_curated
panF; Na+/solute symporter
13_2_20cm_scaffold_5725_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5325..5684
DNA (360bp) protein (120aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A966_GEMAT
erpA; putative iron-sulfur cluster insertion protein ErpA Tax=GWC2_Gemmatimonadetes_71_10_curated
iron-sulfur cluster assembly accessory protein
13_2_20cm_scaffold_5725_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5902..7230
DNA (1329bp) protein (443aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A968_GEMAT
putative sodium/solute symporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
SSS sodium solute transporter superfamily
13_2_20cm_scaffold_5725_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7234..8160
DNA (927bp) protein (309aa)
Putative N-acetylglucosamine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A969_GEMAT
ATPase BadF/BadG/BcrA/BcrD type
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:AHG91146.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_5725_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8251..9414)
DNA (1164bp) protein (388aa)
Sodium:dicarboxylate symporter family protein id=3114362 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sodium:dicarboxylate symporter family protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
gltP; sodium:dicarboxylate symporter
13_2_20cm_scaffold_5725_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9411..10913)
DNA (1503bp) protein (501aa)
Putative permease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A971_GEMAT
putative permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
putative permease
13_2_20cm_scaffold_5725_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11043..13085)
DNA (2043bp) protein (681aa)
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
K(+)-insensitive pyrophosphate-energized proton pump id=1842624 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Pyrophosphate-energized proton pump
13_2_20cm_scaffold_5725_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13125..13664)
DNA (540bp) protein (180aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_5725_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13941..14357)
DNA (417bp) protein (139aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RBG_16_Gemmatimonadetes_66_8_curated
Biopolymer transport protein ExbD/TolR
13_2_20cm_scaffold_5725_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14361..14816)
DNA (456bp) protein (152aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A974_GEMAT
putative biopolymer transport protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Biopolymer transport protein ExbD/TolR
13_2_20cm_scaffold_5725_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14797..15546)
DNA (750bp) protein (250aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_2_20cm_scaffold_5725_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15584..16264)
DNA (681bp) protein (227aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
tonB; putative TonB protein
13_2_20cm_scaffold_5725_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16453..16791)
DNA (339bp) protein (113aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_2_20cm_scaffold_5725_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17187..17909)
DNA (723bp) protein (241aa)
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_5725_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17961..19415)
DNA (1455bp) protein (485aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-binding region ATPase domain protein
13_2_20cm_scaffold_5725_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19417..20085)
DNA (669bp) protein (223aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT rbh
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_2_20cm_scaffold_5725_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20082..21638)
DNA (1557bp) protein (519aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_2_20cm_scaffold_5725_21
unknown

Not on your lists

comp(21650..22192)
DNA (543bp) protein (181aa)

This feature has no annotations

13_2_20cm_scaffold_5725_22
unknown

Not on your lists

22200..22826
DNA (627bp) protein (209aa)

This feature has no annotations

Displaying 22 items

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