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13_2_20cm_scaffold_7097

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_7097_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1908)
DNA (1908bp) protein (636aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A491_GEMAT
Phenylalanyl-tRNA synthetase beta chain
13_2_20cm_scaffold_7097_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(1905..2903)
DNA (999bp) protein (333aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJM4_9FIRM
Phenylalanyl-tRNA synthetase alpha chain
13_2_20cm_scaffold_7097_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(2906..3259)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL20_GEMAT
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rplT; 50S ribosomal protein L20
13_2_20cm_scaffold_7097_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(3269..3463)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LW82_TEPAE
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RBG_16_Gemmatimonadetes_66_8_curated
50S ribosomal protein L35
13_2_20cm_scaffold_7097_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3546..4034)
DNA (489bp) protein (163aa)
Translation initiation factor IF-3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A495_GEMAT
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
infC; translation initiation factor IF-3
13_2_20cm_scaffold_7097_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4290..5105)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A496_GEMAT
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG90986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_7097_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5102..5593)
DNA (492bp) protein (164aa)
dnaQ; DNA polymerase III epsilon subunit (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dnaQ; DNA polymerase III epsilon subunit (EC:2.7.7.7)
DNA polymerase III epsilon subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A497_GEMAT
13_2_20cm_scaffold_7097_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5924..7159)
DNA (1236bp) protein (412aa)
arginine deiminase; K01478 arginine deiminase [EC:3.5.3.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Arginine deiminase id=3915302 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
arginine deiminase
13_2_20cm_scaffold_7097_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7345..7965)
DNA (621bp) protein (207aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A498_GEMAT
redox-sensing transcriptional repressor Rex; K01926 redox-sensing transcriptional repressor Tax=RBG_16_Gemmatimonadetes_66_8_curated
redox-sensing transcriptional repressor Rex
13_2_20cm_scaffold_7097_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7979..10366)
DNA (2388bp) protein (796aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A0_GEMAT
putative phosphatase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein phosphatase 2C domain protein
13_2_20cm_scaffold_7097_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10381..10839)
DNA (459bp) protein (153aa)
Response regulator receiver protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY3_DESB2
response regulator receiver protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator receiver protein
13_2_20cm_scaffold_7097_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10842..11177)
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A2_GEMAT
putative anti sigma factor antagonist Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
anti-anti-sigma factor
13_2_20cm_scaffold_7097_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11162..12097)
DNA (936bp) protein (312aa)
pta; phosphate acetyltransferase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A3_GEMAT
13_2_20cm_scaffold_7097_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12094..12591)
DNA (498bp) protein (166aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A4_GEMAT
13_2_20cm_scaffold_7097_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12588..13106)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_7097_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13208..13582)
DNA (375bp) protein (125aa)
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A6_GEMAT
Displaying 16 items

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