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13_2_20cm_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_12_1
unknown

Not on your lists

comp(2..190)
DNA (189bp) protein (63aa)

This feature has no annotations

13_2_20cm_scaffold_12_2
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(368..1312)
DNA (945bp) protein (315aa)
lipoprotein id=24390815 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
lipoprotein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
putative lipoprotein
13_2_20cm_scaffold_12_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1477..2697
DNA (1221bp) protein (407aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
phosphopentomutase (EC:5.4.2.7)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365956D
13_2_20cm_scaffold_12_4
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3095..3925)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Thermus thermophilus RepID=Q5SKH5_THET8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD70491.1}; TaxID=300852 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain HB8 / ATC
13_2_20cm_scaffold_12_5
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3922..4629)
DNA (708bp) protein (236aa)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZP9_TERSS rbh
phosphoadenosine phosphosulfate reductase
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:ADV84392.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensi
13_2_20cm_scaffold_12_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4631..6391)
DNA (1761bp) protein (587aa)
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase la
Sulfate adenylyltransferase subunit 1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SD3_SOLUE
13_2_20cm_scaffold_12_7
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6391..7368)
DNA (978bp) protein (326aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicel
sulfate adenylyltransferase subunit 2 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6BE72
sulfate adenylyltransferase, small subunit
13_2_20cm_scaffold_12_8
unknown

Not on your lists

comp(7586..8089)
DNA (504bp) protein (168aa)

This feature has no annotations

13_2_20cm_scaffold_12_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(8031..8975)
DNA (945bp) protein (315aa)
von Willebrand factor, type A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T75_SOLUE
von Willebrand factor A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
von Willebrand factor, type A
13_2_20cm_scaffold_12_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9037..10179)
DNA (1143bp) protein (381aa)
von Willebrand factor, type A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INP3_KORVE
von Willebrand factor A
von Willebrand factor, type A {ECO:0000313|EMBL:ABF41507.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_2_20cm_scaffold_12_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10381..11130
DNA (750bp) protein (250aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_00057}; EC=2.7.7.38 {ECO:0000255|HAMAP-Rule:MF_00057};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000255|HAMAP-Rule:M
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=KDSB_SOLUE
13_2_20cm_scaffold_12_12
Zygosaccharomyces rouxii, Zygosaccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(11326..12918)
DNA (1593bp) protein (531aa)
ZYRO0F02728p n=1 Tax=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) RepID=C5DX72_ZYGRC
hypothetical protein
ZYRO0F02728p {ECO:0000313|EMBL:CAR28383.1}; TaxID=559307 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces.;"
13_2_20cm_scaffold_12_13
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12915..13382)
DNA (468bp) protein (156aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
13_2_20cm_scaffold_12_14
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

13715..15325
DNA (1611bp) protein (537aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Carboxyl-terminal protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN73_KORVE
carboxyl-terminal protease
13_2_20cm_scaffold_12_15
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

15949..17478
DNA (1530bp) protein (510aa)
pyrG; CTP synthetase; K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B72F37
13_2_20cm_scaffold_12_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

17595..18437
DNA (843bp) protein (281aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=KDSA_GEOLS
2-dehydro-3-deoxyphosphooctonate aldolase
13_2_20cm_scaffold_12_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

18434..19393
DNA (960bp) protein (320aa)
KpsF/GutQ family protein; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
KpsF/GutQ family protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST9_KORVE
KpsF/GutQ family protein
13_2_20cm_scaffold_12_18
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19456..20004
DNA (549bp) protein (183aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:AEU36672.1}; EC=3.1.3.45 {ECO:0000313|EMBL:AEU36672.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteri
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NX58_GRAMM
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
13_2_20cm_scaffold_12_19
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20543..20821
DNA (279bp) protein (93aa)
inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=575540 species="Bac
Inorganic pyrophosphatase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2T2_ISOPI
13_2_20cm_scaffold_12_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20821..21093
DNA (273bp) protein (91aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=204669 species="Bac
Inorganic pyrophosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJI2_KORVE
inorganic diphosphatase
13_2_20cm_scaffold_12_21
unknown

Not on your lists

21175..21441
DNA (267bp) protein (89aa)

This feature has no annotations

13_2_20cm_scaffold_12_22

Not on your lists

21460..21945
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030E8297
Marine sediment metagenome DNA, contig: S01H1_S05870 {ECO:0000313|EMBL:GAG09718.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_2_20cm_scaffold_12_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22041..22745
DNA (705bp) protein (235aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
Pseudouridine synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR68_KORVE
pseudouridine synthase
13_2_20cm_scaffold_12_24
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22855..23124
DNA (270bp) protein (90aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETY80255.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ETY80255.1};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
13_2_20cm_scaffold_12_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23198..24070
DNA (873bp) protein (291aa)
Creatininase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZR5_TERSS
Creatininase
Creatininase {ECO:0000313|EMBL:AHG92632.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_12_26
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

24348..25772
DNA (1425bp) protein (475aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:ABG03215.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ABG03215.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Ru
Amidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZG3_RUBXD
13_2_20cm_scaffold_12_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26125..26520)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382399D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK05041.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
13_2_20cm_scaffold_12_28
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26788..28026)
DNA (1239bp) protein (413aa)
Oxidoreductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QU6_SOLUE
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87974.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_2_20cm_scaffold_12_29
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28044..28973)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037325A8 rbh
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADV83518.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.
13_2_20cm_scaffold_12_30
unknown

Not on your lists

29758..30240
DNA (483bp) protein (161aa)

This feature has no annotations

Displaying items 1-30 of 72 in total

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