ggKbase home page

13_2_20cm_scaffold_3556

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3556_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

2..478
DNA (477bp) protein (159aa)
transcriptional regulator domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
TPR repeat-containing serine/threonin protein kinase id=24431304 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_2_20cm_scaffold_3556_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

664..1725
DNA (1062bp) protein (354aa)
Bll2990 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QY2_BRADU
hypothetical protein
Bll2990 protein {ECO:0000313|EMBL:BAC48255.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
13_2_20cm_scaffold_3556_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2620..3894)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000377391E rbh
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:AID29175.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteria
beta-lactamase
13_2_20cm_scaffold_3556_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4096..5061
DNA (966bp) protein (322aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI000382421F rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AID29176.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhi
LysR family transcriptional regulator
13_2_20cm_scaffold_3556_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5288..5734
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WTZ3_DELAC
13_2_20cm_scaffold_3556_6
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5698..5862)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IHJ7_9SPHN
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:KHK92549.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
13_2_20cm_scaffold_3556_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5873..6283)
DNA (411bp) protein (137aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0A4_9CHLR
Cupin {ECO:0000313|EMBL:ETR78752.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
cupin 2 conserved barrel domain-containing protein
13_2_20cm_scaffold_3556_8
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6335..6751)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YNJ8_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR06081.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;
antibiotic biosynthesis monooxygenase
13_2_20cm_scaffold_3556_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6735..7511)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D593_BRAJP
4-carboxymuconolactone decarboxylase, putative {ECO:0000313|EMBL:AHY49841.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sou
4-carboxymuconolactone decarboxylase
13_2_20cm_scaffold_3556_10
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7742..8740)
DNA (999bp) protein (333aa)
Membrane protein, major facilitator superfamily n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EE69_GEOBB rbh
major facilitator superfamily protein
Membrane protein, major facilitator superfamily {ECO:0000313|EMBL:ACH37807.2}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" sou
13_2_20cm_scaffold_3556_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9170..10066)
DNA (897bp) protein (299aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRX7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM26719.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotonon
putative transcriptional regulator LysR
13_2_20cm_scaffold_3556_12
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10265..10621
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J892_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC79341.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
13_2_20cm_scaffold_3556_13
Burkholderia sp. A9, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10681..11715
DNA (1035bp) protein (345aa)
zinc-dependent alcohol dehydrogenase oxidoreductase (EC:1.1.1.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DDE57 rbh
IMP dehydrogenase {ECO:0000313|EMBL:KHK59511.1}; TaxID=1365108 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. A9.;"
13_2_20cm_scaffold_3556_14
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11756..12226
DNA (471bp) protein (157aa)
iorA; isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:CAL61356.1}; EC=1.3.99.16 {ECO:0000313|EMBL:CAL61356.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Isoquinoline 1-oxidoreductase alpha subunit n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4B9_HERAR
13_2_20cm_scaffold_3556_15
unknown

Not on your lists

comp(12542..12736)
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 15 items

View Taxonomy