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13_2_20cm_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 93 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(520..774)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_2_20cm_scaffold_5_2
unknown

Not on your lists

comp(1639..1785)
DNA (147bp) protein (49aa)

This feature has no annotations

13_2_20cm_scaffold_5_3
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2168..2374)
DNA (207bp) protein (69aa)
Sec-independent protein translocase protein TatA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECX2_9SPHN
preprotein translocase subunit TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
13_2_20cm_scaffold_5_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2469..4394)
DNA (1926bp) protein (642aa)
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S0_SOLUE
selenocysteine-specific translation elongation factor SelB; K03833 selenocysteine-specific elongation factor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
selenocysteine-specific translation elongation factor SelB
13_2_20cm_scaffold_5_5
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4481..5233)
DNA (753bp) protein (251aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01200};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; Short=OMPDCase {ECO:0000255
Orotidine 5'-phosphate decarboxylase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=PYRF_GEOLS
13_2_20cm_scaffold_5_6
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(5258..5632)
DNA (375bp) protein (125aa)
Rare lipoprotein A n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M698_9CYAN
Rare lipoprotein A {ECO:0000313|EMBL:ELS05359.1}; Flags: Precursor;; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
rare lipoprotein A
13_2_20cm_scaffold_5_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5741..6679)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036C0863
dihydroorotate oxidase B, catalytic subunit
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
13_2_20cm_scaffold_5_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6736..8502)
DNA (1767bp) protein (589aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12557407 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hypothetical protein
13_2_20cm_scaffold_5_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

8644..9165
DNA (522bp) protein (174aa)
Uracil phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037CFDBF
13_2_20cm_scaffold_5_10

Not on your lists

9189..9419
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL82838.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_5_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

9502..10521
DNA (1020bp) protein (340aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=PYRB_SOLUE
13_2_20cm_scaffold_5_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10508..11785
DNA (1278bp) protein (426aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
dihydroorotase (EC:3.5.2.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003772307
13_2_20cm_scaffold_5_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11770..12552)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ99_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43051.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_scaffold_5_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12679..13563)
DNA (885bp) protein (295aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037D61D7
phosphomethylpyrimidine kinase
13_2_20cm_scaffold_5_15

Not on your lists

comp(14178..15497)
DNA (1320bp) protein (440aa)
NAD-specific glutamate dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1BJB3_9ZZZZ
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:EQD53339.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glu/Leu/Phe/Val dehydrogenase
13_2_20cm_scaffold_5_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16171..17445)
DNA (1275bp) protein (425aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUQ4_KORVE
seryl-tRNA synthetase
13_2_20cm_scaffold_5_17
unknown

Not on your lists

comp(17519..17620)
DNA (102bp) protein (34aa)

This feature has no annotations

13_2_20cm_scaffold_5_18
unknown

Not on your lists

17710..17940
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_5_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17958..18371)
DNA (414bp) protein (138aa)
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ABF43302.1}; EC=5.1.99.1 {ECO:0000313|EMBL:ABF43302.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Ko
Methylmalonyl-CoA epimerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ8_KORVE
methylmalonyl-CoA epimerase
13_2_20cm_scaffold_5_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18421..18873
DNA (453bp) protein (151aa)
Transcriptional regulator, MarR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ9_KORVE
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABF43301.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_5_21
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19591..20967)
DNA (1377bp) protein (459aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G514_SORC5
hypothetical protein Tax=RBG_16_Gamma2_64_10_curated
hypothetical protein
13_2_20cm_scaffold_5_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(20964..21563)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ54_CHLTF
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
sigma-70 family RNA polymerase sigma factor
13_2_20cm_scaffold_5_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(21820..23163)
DNA (1344bp) protein (448aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=GLMM_SOLUE
13_2_20cm_scaffold_5_24
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23417..24487
DNA (1071bp) protein (357aa)
hypothetical protein Tax=CG_Delta_02
Putative uncharacterized protein id=2731368 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
13_2_20cm_scaffold_5_25
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24539..25510
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371F55F
Nuclease S1 {ECO:0000313|EMBL:GAN98553.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinu
S1/P1 nuclease
13_2_20cm_scaffold_5_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25657..26235)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK7_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43293.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_5_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(26322..27176)
DNA (855bp) protein (285aa)
pantothenate synthetase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00037646FF
pantoate/beta-alanine ligase
13_2_20cm_scaffold_5_28
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(27222..27731)
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFF0_9BACT
hypothetical protein Tax=RBG_16_Zixibacteria_40_9_curated
hypothetical protein
13_2_20cm_scaffold_5_29
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(27834..28736)
DNA (903bp) protein (301aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=PANB_KORVE rbh
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
13_2_20cm_scaffold_5_30
unknown

Not on your lists

28975..29265
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying items 1-30 of 93 in total

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