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13_2_20cm_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_59_1
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

407..1081
DNA (675bp) protein (225aa)
chemotaxis protein CheY n=1 Tax=Brevibacillus sp. phR RepID=UPI00031DA6B6
two-component system regulatory protein
Chemotaxis protein CheY {ECO:0000313|EMBL:ESX85362.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
13_2_20cm_scaffold_59_2
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

1178..2176
DNA (999bp) protein (333aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ACI18430.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ACI18430.1};; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="
UDP-glucose 4-epimerase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YEV8_DICT6
13_2_20cm_scaffold_59_3
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(2173..2952)
DNA (780bp) protein (260aa)
Group 2 family glycosyl transferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UKW6_MYXSD rbh
Glycosyltransferases involved in cell wall biogenesis Tax=RBG_16_RIF03_38_11_curated
group 2 family glycosyl transferase
13_2_20cm_scaffold_59_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3112..4503
DNA (1392bp) protein (464aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD7_KORVE rbh
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ABF40213.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_2_20cm_scaffold_59_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

4555..6234
DNA (1680bp) protein (560aa)
Carbamoyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WJ6_SOLUE rbh
carbamoyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
carbamoyltransferase
13_2_20cm_scaffold_59_6
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

6402..7727
DNA (1326bp) protein (442aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6S7_ACIC5
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_scaffold_59_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(8030..9223)
DNA (1194bp) protein (398aa)
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RLMN_KORVE
hypothetical protein
13_2_20cm_scaffold_59_8
unknown

Not on your lists

9273..9470
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_scaffold_59_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9433..10029
DNA (597bp) protein (199aa)
cysteine dioxygenase type I; K00456 cysteine dioxygenase [EC:1.13.11.20] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Cysteine dioxygenase type I n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN62_KORVE
cysteine dioxygenase type I
13_2_20cm_scaffold_59_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10178..11455
DNA (1278bp) protein (426aa)
Peptidase M16 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QF8_SOLUE
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ABJ88112.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter us
13_2_20cm_scaffold_59_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11784..12674)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003727189
ROK family protein
ROK family protein {ECO:0000313|EMBL:ABJ82068.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (st
13_2_20cm_scaffold_59_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12834..14222)
DNA (1389bp) protein (463aa)
sthA; soluble pyridine nucleotide transhydrogenase (EC:1.6.1.1)
Soluble pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:ACO32075.1}; EC=1.6.1.1 {ECO:0000313|EMBL:ACO32075.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriacea
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BEABF
13_2_20cm_scaffold_59_13
unknown

Not on your lists

comp(14242..14376)
DNA (135bp) protein (45aa)

This feature has no annotations

13_2_20cm_scaffold_59_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14502..15305
DNA (804bp) protein (268aa)
Beta-lactamase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIH4_KORVE
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABF43326.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_2_20cm_scaffold_59_15
unknown

Not on your lists

15388..15492
DNA (105bp) protein (35aa)

This feature has no annotations

13_2_20cm_scaffold_59_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15639..16844
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003632505
peptidase dimerisation domain-containing protein
Peptidase dimerisation domain protein {ECO:0000313|EMBL:ABJ87897.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
13_2_20cm_scaffold_59_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16841..17542
DNA (702bp) protein (234aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; S
Dihydrodipicolinate reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R26_SOLUE
13_2_20cm_scaffold_59_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17627..18571
DNA (945bp) protein (315aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R27_SOLUE
13_2_20cm_scaffold_59_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18552..19391
DNA (840bp) protein (280aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:ABJ87892.1}; EC=2.3.1.117 {ECO:0000313|EMBL:ABJ87892.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacter
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BD55D rbh
13_2_20cm_scaffold_59_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19584..20762)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5E3FD
PBS lyase
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABJ88155.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibact
13_2_20cm_scaffold_59_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(20771..22144)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB4_SOLUE rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_2_20cm_scaffold_59_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(22141..22935)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88157.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_59_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(22932..23585)
DNA (654bp) protein (218aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB2_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ88158.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so
13_2_20cm_scaffold_59_24
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(24235..26847)
DNA (2613bp) protein (871aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EDD11
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_scaffold_59_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(27000..29651)
DNA (2652bp) protein (884aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EFAA5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_2_20cm_scaffold_59_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(29695..30051)
DNA (357bp) protein (119aa)
Transcriptional regulator, PadR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITP0_KORVE
PadR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PadR family transcriptional regulator
13_2_20cm_scaffold_59_27
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

30431..31771
DNA (1341bp) protein (447aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Adenylosuccinate lyase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IME7_KORVE
adenylosuccinate lyase
13_2_20cm_scaffold_59_28
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(31969..32538)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035CE09B
translation elongation factor P (EF-P); K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
efp; translation elongation factor P
13_2_20cm_scaffold_59_29
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(33117..34955)
DNA (1839bp) protein (613aa)
aminopeptidase P; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Aminopeptidase P n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM5_KORVE
aminopeptidase P
13_2_20cm_scaffold_59_30
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

35193..35891
DNA (699bp) protein (233aa)
Transcription elongation factor GreA n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVW3_ACISM
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
GreA/GreB family elongation factor
Displaying items 1-30 of 71 in total

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