ggKbase home page

13_2_20cm_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_86_1
unknown

Not on your lists

669..1019
DNA (351bp) protein (117aa)

This feature has no annotations

13_2_20cm_scaffold_86_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2187..3281
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85576.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_86_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3321..3944)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB7_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42333.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_86_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4019..5404)
DNA (1386bp) protein (462aa)
4-aminobutyrate aminotransferase apoenzyme {ECO:0000313|EMBL:ABF40536.1}; EC=2.6.1.19 {ECO:0000313|EMBL:ABF40536.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae
4-aminobutyrate aminotransferase apoenzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG4_KORVE
4-aminobutyrate aminotransferase
13_2_20cm_scaffold_86_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5581..7062)
DNA (1482bp) protein (494aa)
Aldehyde dehydrogenase (Acceptor) {ECO:0000313|EMBL:ABF40537.1}; EC=1.2.99.3 {ECO:0000313|EMBL:ABF40537.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candida
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG3_KORVE rbh
aldehyde dehydrogenase
13_2_20cm_scaffold_86_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7089..8546)
DNA (1458bp) protein (486aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG2_KORVE
amino acid transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF40538.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
13_2_20cm_scaffold_86_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8612..9991)
DNA (1380bp) protein (460aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:ABF40539.1}; EC=5.4.3.8 {ECO:0000313|EMBL:ABF40539.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; C
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG1_KORVE
glutamate-1-semialdehyde 2,1-aminomutase
13_2_20cm_scaffold_86_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10135..14151)
DNA (4017bp) protein (1339aa)
TonB-dependent receptor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG0_KORVE
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABF40540.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_86_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14259..15089
DNA (831bp) protein (277aa)
Transcriptional regulator, MerR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRF9_KORVE
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABF40541.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_86_10
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

15103..16842
DNA (1740bp) protein (580aa)
Glr0375 protein id=8267264 bin=CD_OP8_4m species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein; K07047 Tax=RBG_13_Aminicenantes_59_9_curated
hypothetical protein
13_2_20cm_scaffold_86_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16854..17915
DNA (1062bp) protein (354aa)
ABC spermidine/putrescine transporter, periplasmic ligand binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRF8_KORVE
spermidine/putrescine ABC transporter substrate-binding protein
ABC spermidine/putrescine transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:ABF40542.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacter
13_2_20cm_scaffold_86_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17912..18991
DNA (1080bp) protein (360aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candida
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRF7_KORVE
spermidine/putrescine ABC transporter ATPase
13_2_20cm_scaffold_86_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19009..19854
DNA (846bp) protein (282aa)
ABC spermidine/putrescine transporter, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRF6_KORVE
spermidine/putrescine ABC transporter inner membrane protein
ABC spermidine/putrescine transporter, inner membrane subunit {ECO:0000313|EMBL:ABF40544.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;
13_2_20cm_scaffold_86_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19851..20684
DNA (834bp) protein (278aa)
ABC spermidine/putrescine transporter, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRF5_KORVE
spermidine/putrescine ABC transporter inner membrane protein
ABC spermidine/putrescine transporter, inner membrane subunit {ECO:0000313|EMBL:ABF40545.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
13_2_20cm_scaffold_86_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

20681..22384
DNA (1704bp) protein (568aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000313|EMBL:ABJ81073.1}; EC=3.5.2.3 {ECO:0000313|EMBL:ABJ81073.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soliba
Dihydroorotase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CZ3_SOLUE
13_2_20cm_scaffold_86_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(22424..23998)
DNA (1575bp) protein (525aa)
Peptidase S41 n=1 Tax=Paenibacillus vortex V453 RepID=E5YXF2_9BACL
interphotoreceptor retinoid-binding protein
Interphotoreceptor retinoid-binding protein {ECO:0000313|EMBL:AIE85544.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source=
13_2_20cm_scaffold_86_17
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(23991..24341)
DNA (351bp) protein (117aa)
PadR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B62612
hypothetical protein
Glr0686 protein {ECO:0000313|EMBL:BAC88627.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_scaffold_86_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

24507..24857
DNA (351bp) protein (117aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomon
Carboxymuconolactone decarboxylase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUS3_9BACT
alkylhydroperoxidase like protein, AhpD family
13_2_20cm_scaffold_86_19
unknown

Not on your lists

comp(25168..25848)
DNA (681bp) protein (227aa)

This feature has no annotations

13_2_20cm_scaffold_86_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

26233..26478
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F17FC
Uncharacterized protein {ECO:0000313|EMBL:ABJ83302.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_86_21
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(26534..28054)
DNA (1521bp) protein (507aa)
GAF sensor protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_2_20cm_scaffold_86_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(28419..29588)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ31_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_2_20cm_scaffold_86_23
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

29886..30740
DNA (855bp) protein (285aa)
Zinc transporter ZitB n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F2J4_ACIC5
zinc transporter ZitB
Zinc transporter ZitB {ECO:0000313|EMBL:ACO32885.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATC
13_2_20cm_scaffold_86_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

30840..32759
DNA (1920bp) protein (640aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020S1_SOLUE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84568.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_86_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

33338..33673
DNA (336bp) protein (112aa)
anti-sigma factor antagonist n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4FA0F
anti-anti-sigma factor; K04749 anti-sigma B factor antagonist Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
anti-anti-sigma factor
13_2_20cm_scaffold_86_26
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

33764..34462
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382AB36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35964.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_2_20cm_scaffold_86_27
unknown

Not on your lists

comp(34638..35042)
DNA (405bp) protein (135aa)

This feature has no annotations

13_2_20cm_scaffold_86_28
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

35292..35795
DNA (504bp) protein (168aa)
Peptidase T2 asparaginase 2 {ECO:0000313|EMBL:EMI43600.1}; EC=3.-.-.- {ECO:0000313|EMBL:EMI43600.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetacea
Peptidase T2 asparaginase 2 n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T3B6_9PLAN
hypothetical protein
13_2_20cm_scaffold_86_29

Not on your lists

comp(35953..37785)
DNA (1833bp) protein (611aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium
Methylenetetrahydrofolate reductase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LH90_9BACT
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase
13_2_20cm_scaffold_86_30
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(37971..39359)
DNA (1389bp) protein (463aa)
cysteine synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Cysteine synthase id=3525768 bin=GWA2_Elusimicrobia_66_18 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cystathionine beta-synthase
Displaying items 1-30 of 48 in total

View Taxonomy