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13_2_20cm_scaffold_1131

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1131_1
unknown

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)

This feature has no annotations

13_2_20cm_scaffold_1131_2
unknown

Not on your lists

comp(296..427)
DNA (132bp) protein (44aa)

This feature has no annotations

13_2_20cm_scaffold_1131_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(625..1749)
DNA (1125bp) protein (375aa)
Methicillin resistance protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IXA0_METNO rbh
Methicillin resistance protein
Methicillin resistance protein {ECO:0000313|EMBL:ACL63141.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylo
13_2_20cm_scaffold_1131_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2017..2919)
DNA (903bp) protein (301aa)
ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=CSP1_6_Rokubacteria
ABC transporter permease; K02034 peptide/nickel transport system permease protein id=14625228 bin=bin7_NC10_sister species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_2_20cm_scaffold_1131_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2919..3923)
DNA (1005bp) protein (335aa)
dipeptide/oligopeptide/nickel ABC transporter permease id=14625229 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
dipeptide/oligopeptide/nickel ABC transporter permease Tax=CSP1_6_Rokubacteria
binding-protein-dependent transport system inner membrane protein
13_2_20cm_scaffold_1131_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3952..5553)
DNA (1602bp) protein (534aa)
oligopeptide/dipeptide ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=14625230 bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
oligopeptide/dipeptide ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
oligopeptide/dipeptide ABC transporter peptide-binding protein
13_2_20cm_scaffold_1131_7
unknown

Not on your lists

comp(5611..5859)
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_scaffold_1131_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5991..6590)
DNA (600bp) protein (200aa)
membrane protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CC8B
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_1131_9
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

6808..7503
DNA (696bp) protein (232aa)
Putative uncharacterized protein id=1251357 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
hypothetical protein
13_2_20cm_scaffold_1131_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7617..8090)
DNA (474bp) protein (158aa)
acetyl-CoA synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Possible acetyl-CoA synthetase id=3859498 bin=GWA2_Methylomirabilis_73_35 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1131_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8219..9325
DNA (1107bp) protein (369aa)
id=4695023 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4695023 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_1131_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9384..9995)
DNA (612bp) protein (204aa)
resA; thiol-disulfide oxidoreductase ResA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiol-disulfide oxidoreductase resA id=2724803 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
resA; thiol-disulfide oxidoreductase resA
13_2_20cm_scaffold_1131_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10046..10753)
DNA (708bp) protein (236aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4820585 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_1131_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10741..11532)
DNA (792bp) protein (264aa)
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related protein id=4585788 bin=GWF2_Methylomirabilis_70_14 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein
13_2_20cm_scaffold_1131_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11514..12464)
DNA (951bp) protein (317aa)
Inner-membrane translocator id=2545761 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_2_20cm_scaffold_1131_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12457..13335)
DNA (879bp) protein (293aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Inner-membrane translocator id=2724788 bin=GWC2_Methylomirabilis_70_16 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
inner-membrane translocator
13_2_20cm_scaffold_1131_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13342..14028)
DNA (687bp) protein (229aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Extracellular ligand-binding receptor id=2724781 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
extracellular ligand-binding receptor
13_2_20cm_scaffold_1131_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14473..15081)
DNA (609bp) protein (203aa)
id=2724780 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=2724780 Tax=GWC2_Rokubacteria_70_16_curated
13_2_20cm_scaffold_1131_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15078..15620)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2545782 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1131_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16145..18772
DNA (2628bp) protein (876aa)
amidohydrolase 3; K15358 enamidase [EC:3.5.2.18] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidohydrolase 3 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3H1_THERP
amidohydrolase 3
13_2_20cm_scaffold_1131_21
unknown

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18753..18968
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_1131_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18955..21378
DNA (2424bp) protein (808aa)
molybdopterin binding oxidoreductase large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
Molybdopterin binding oxidoreductase large subunit id=3729535 bin=GWF2_Methylomirabilis_70_14 species=Geobacillus kaustophilus genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
molybdopterin binding oxidoreductase large subunit
13_2_20cm_scaffold_1131_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21375..22241
DNA (867bp) protein (289aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
carbon-monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase id=4915855 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_1131_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22234..22707
DNA (474bp) protein (158aa)
(2Fe-2S)-binding protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_70_23_curated
(2Fe-2S)-binding protein id=4915854 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
(2Fe-2S)-binding protein
13_2_20cm_scaffold_1131_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22877..25228
DNA (2352bp) protein (784aa)
carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
13_2_20cm_scaffold_1131_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25284..25994)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B58410
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_2_20cm_scaffold_1131_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26022..26693)
DNA (672bp) protein (224aa)
Alpha/beta hydrolase id=4631986 bin=GWF2_Methylomirabilis_70_14 species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase Tax=GWA2_Rokubacteria_70_23_curated
thioesterase
13_2_20cm_scaffold_1131_28
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26874..27107)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3C2_GEODF
Uncharacterized protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
13_2_20cm_scaffold_1131_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27213..28013
DNA (801bp) protein (267aa)
Spermidine/putrescine-binding protein periplasmic protein-like protein substrate-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UW20_9RHIZ
Spermidine/putrescine-binding protein periplasmic protein-like protein substrate-binding protein {ECO:0000313|EMBL:ENN84951.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
putative polyamine ABC transporter, substrate-binding protein
Displaying 29 items

View Taxonomy