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13_2_20cm_scaffold_1153

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1153_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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3..338
DNA (336bp) protein (112aa)
tRNA 2-methylthioadenosine synthase -like protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
tRNA (2-methylthio-N6-threonylcarbamyl-A37) methylthiotransferase id=4947253 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MiaB-like tRNA modifying enzyme
13_2_20cm_scaffold_1153_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

335..1225
DNA (891bp) protein (297aa)
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=GWA2_Rokubacteria_73_35_curated
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=14625897 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
13_2_20cm_scaffold_1153_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1218..1982
DNA (765bp) protein (255aa)
PfkB id=4947255 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carbohydrate kinase Tax=GWA2_Rokubacteria_73_35_curated
sugar kinase
13_2_20cm_scaffold_1153_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2050..2895
DNA (846bp) protein (282aa)
ExsB family protein; K06864 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PP-loop domain-containing protein; K06864 uncharacterized protein id=14625899 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ExsB family protein
13_2_20cm_scaffold_1153_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2888..3646
DNA (759bp) protein (253aa)
NCAIR mutase-like protein; K06898 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase id=4947257 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase
13_2_20cm_scaffold_1153_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3760..4944
DNA (1185bp) protein (395aa)
TIGR00299 family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TIGR00299 family protein id=14625901 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TIGR00299 family protein
13_2_20cm_scaffold_1153_7
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4963..5721)
DNA (759bp) protein (253aa)
Pentapeptide repeat protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C1N0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV05937.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn1
pentapeptide repeat-containing protein
13_2_20cm_scaffold_1153_8
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5736..6185)
DNA (450bp) protein (150aa)
Cytochrome c, class I n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WIX3_VEREI
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABM57580.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source
13_2_20cm_scaffold_1153_9
CSP1_5_NC10, NC10, Bacteria

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comp(6231..7076)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003689AF1
hypothetical protein Tax=CSP1_5_NC10
quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein
13_2_20cm_scaffold_1153_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7171..8952)
DNA (1782bp) protein (594aa)
Methanol dehydrogenase subunit 1 n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWM0_9PROT
Methanol dehydrogenase subunit 1 {ECO:0000313|EMBL:EGY02344.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nit
PQQ-dependent dehydrogenase
13_2_20cm_scaffold_1153_11
unknown

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9230..9508
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_scaffold_1153_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10041..10517
DNA (477bp) protein (159aa)
(2Fe-2S)-binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
[2Fe-2S] binding domain protein id=5010006 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
[2Fe-2S] binding domain-containing protein
13_2_20cm_scaffold_1153_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10527..12926
DNA (2400bp) protein (800aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2) Tax=GWC2_Rokubacteria_70_16_curated
Carbon-monoxide dehydrogenase (Acceptor) id=4489779 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_2_20cm_scaffold_1153_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12936..13805
DNA (870bp) protein (290aa)
carbon monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWA2_Rokubacteria_73_35_curated
Molybdopterin dehydrogenase FAD-binding protein id=5010008 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
molybdopterin dehydrogenase FAD-binding protein
13_2_20cm_scaffold_1153_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14063..14638
DNA (576bp) protein (192aa)
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdenum cofactor cytidylyltransferase id=5010009 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MobA-like protein
13_2_20cm_scaffold_1153_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14678..15541
DNA (864bp) protein (288aa)
ATPase AAA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase associated with various cellular activities AAA_5 id=5010010 bin=GWA2_Methylomirabilis_73_35 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase
13_2_20cm_scaffold_1153_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15544..16689
DNA (1146bp) protein (382aa)
VWA domain containing CoxE-like protein; K07161 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
VWA domain containing CoxE-like protein id=5010011 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
VWA containing CoxE family protein
13_2_20cm_scaffold_1153_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16885..17964
DNA (1080bp) protein (360aa)
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=5010012 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_2_20cm_scaffold_1153_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17961..19001
DNA (1041bp) protein (347aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein
13_2_20cm_scaffold_1153_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18998..19387
DNA (390bp) protein (130aa)
SUF system FeS assembly protein id=5010014 bin=GWA2_Methylomirabilis_73_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=GWA2_Rokubacteria_73_35_curated
NifU family SUF system FeS assembly protein
13_2_20cm_scaffold_1153_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19384..20598
DNA (1215bp) protein (405aa)
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cysteine desulfurase id=5010015 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cysteine desulfurase/selenocysteine lyase
13_2_20cm_scaffold_1153_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20673..21548
DNA (876bp) protein (292aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
agmatinase; K01480 agmatinase [EC:3.5.3.11] id=14627707 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_1153_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21545..22846
DNA (1302bp) protein (434aa)
hypothetical protein; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative protease/transporter id=5010016 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative protease/transporter
13_2_20cm_scaffold_1153_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

22843..23001
DNA (159bp) protein (53aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 24 items

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