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13_2_20cm_scaffold_2020

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2020_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2..454
DNA (453bp) protein (151aa)
two component, sigma54 specific, Fis family transcriptional regulator id=14627680 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
two component sigma-54 specific Fis family transcriptional regulator
13_2_20cm_scaffold_2020_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(605..2221)
DNA (1617bp) protein (539aa)
thiamine pyrophosphate protein TPP binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiamine pyrophosphate protein TPP binding domain protein id=4677275 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiamine pyrophosphate protein TPP binding domain-containing protein
13_2_20cm_scaffold_2020_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2218..3885)
DNA (1668bp) protein (556aa)
Benzoylformate decarboxylase (EC:4.1.1.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thiamine pyrophosphate TPP-binding domain-containing protein; K01576 benzoylformate decarboxylase [EC:4.1.1.7] id=14627836 bin=bin7_NC10_sister species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10 rbh
thiamine pyrophosphate TPP-binding domain-containing protein
13_2_20cm_scaffold_2020_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3926..4051)
DNA (126bp) protein (42aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_scaffold_2020_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(4061..4387)
DNA (327bp) protein (109aa)
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Putative uncharacterized protein id=2164662 bin=GWB2_Chloroflexi_54_36 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
13_2_20cm_scaffold_2020_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4384..4866)
DNA (483bp) protein (161aa)
Putative uncharacterized protein id=4961238 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K09986 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_2020_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4863..6092)
DNA (1230bp) protein (410aa)
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4961237 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dioxygenase
13_2_20cm_scaffold_2020_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6089..7324)
DNA (1236bp) protein (412aa)
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase id=4555257 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
13_2_20cm_scaffold_2020_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7331..7642)
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4115302 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_2020_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7642..8259)
DNA (618bp) protein (206aa)
Glr3452 protein id=4115301 bin=GWA2_Methylomirabilis_73_35 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Na+/solute symporter
Displaying 10 items

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