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13_2_20cm_scaffold_265

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_265_1
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..897)
DNA (897bp) protein (299aa)
Putative ABC-type branched-chain amino acid transport systems, periplasmic binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR4_9BACT id=1247737 bin=RBG9 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
amino acid ABC transporter substrate-binding protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
amino acid ABC transporter substrate-binding protein
13_2_20cm_scaffold_265_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1010..2482
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2M6U7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETX07520.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_2_20cm_scaffold_265_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

2742..3137
DNA (396bp) protein (132aa)
hypothetical protein id=14627725 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
13_2_20cm_scaffold_265_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3147..3563)
DNA (417bp) protein (139aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000369A1BA
glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_scaffold_265_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3577..5880)
DNA (2304bp) protein (768aa)
aldehyde oxidase (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Probable aldehyde oxidase and xanthine dehydrogenase family protein transmembrane id=4975508 bin=GWA2_Methylomirabilis_73_35 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_265_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5873..6343)
DNA (471bp) protein (157aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD binding domain in molybdopterin dehydrogenase id=4975507 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2Fe-2S iron-sulfur cluster binding domain-containing protein
13_2_20cm_scaffold_265_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6340..7218)
DNA (879bp) protein (293aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD binding domain in molybdopterin dehydrogenase id=4975507 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin dehydrogenase FAD-binding protein
13_2_20cm_scaffold_265_8
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7410..8540
DNA (1131bp) protein (377aa)
Peptidase M19 renal dipeptidase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G184_9BURK
Peptidase M19 renal dipeptidase {ECO:0000313|EMBL:EDT10305.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
peptidase M19
13_2_20cm_scaffold_265_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8731..9519)
DNA (789bp) protein (263aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-ketoacyl-(Acyl-carrier-protein) reductase id=4534458 bin=GWF2_Methylomirabilis_70_14 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
short-chain dehydrogenase
13_2_20cm_scaffold_265_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9516..11147)
DNA (1632bp) protein (544aa)
putative N-methylhydantoinase B Tax=GWA2_Rokubacteria_73_35_curated
Putative N-methylhydantoinase B id=4975505 bin=GWA2_Methylomirabilis_73_35 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative N-methylhydantoinase B
13_2_20cm_scaffold_265_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11144..13024)
DNA (1881bp) protein (627aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_73_35_curated
5-oxoprolinase (ATP-hydrolyzing) id=4534454 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hydantoin utilization protein
13_2_20cm_scaffold_265_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13467..14789
DNA (1323bp) protein (441aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4K4_DESTA
Uncharacterized protein {ECO:0000313|EMBL:ETX02168.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative TIM-barrel fold metal-dependent hydrolase
13_2_20cm_scaffold_265_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14856..15137
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02167.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_2_20cm_scaffold_265_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15152..16267
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003490D85
Uncharacterized protein {ECO:0000313|EMBL:ETX04634.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
TIM-barrel fold metal-dependent hydrolase
13_2_20cm_scaffold_265_15
bacterium YEK0313, Bacteria

Not on your lists

16323..17318
DNA (996bp) protein (332aa)
ABC transporter substrate binding protein n=1 Tax=Streptococcus mitis SK569 RepID=F9MLF1_STRMT
ABC transporter substrate binding protein {ECO:0000313|EMBL:CEJ14792.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter substrate-binding protein
13_2_20cm_scaffold_265_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

17381..18040
DNA (660bp) protein (220aa)
glutathione ABC transporter permease GsiD n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000381BCA2
binding-protein-dependent transport systems inner membrane component Tax=RBG_16_Armatimonadetes_67_12_curated
binding-protein-dependent transport system inner membrane protein
13_2_20cm_scaffold_265_17
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

18013..18105
DNA (93bp) protein (31aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component {ECO:0000313|EMBL:AGK60932.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobacea
13_2_20cm_scaffold_265_18
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18128..19609
DNA (1482bp) protein (494aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RSC9_SPHGB
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:ADY14329.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Spha
13_2_20cm_scaffold_265_19
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

19612..20565
DNA (954bp) protein (318aa)
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
Binding-protein-dependent transport systems inner membrane component id=3721810 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_2_20cm_scaffold_265_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20615..21043)
DNA (429bp) protein (143aa)
hypothetical protein id=5081974 bin=GWF1_Burkholderiales_GWF1_66_17 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
13_2_20cm_scaffold_265_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21145..21981
DNA (837bp) protein (279aa)
Aldo/keto reductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ78_KORVE rbh
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABF40972.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain El
13_2_20cm_scaffold_265_22
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21990..22805)
DNA (816bp) protein (272aa)
dienelactone hydrolase (EC:3.1.1.-)
Dienelactone hydrolase {ECO:0000313|EMBL:AEI77854.1}; EC=3.1.1.- {ECO:0000313|EMBL:AEI77854.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
Dienelactone hydrolase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ERP1_CUPNN
13_2_20cm_scaffold_265_23
unknown

Not on your lists

comp(22839..23318)
DNA (480bp) protein (160aa)

This feature has no annotations

13_2_20cm_scaffold_265_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23469..24494
DNA (1026bp) protein (342aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RBD1_9DELT
TRAP dicarboxylate transporter-DctP subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP dicarboxylate transporter-DctP subunit
13_2_20cm_scaffold_265_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24491..25003
DNA (513bp) protein (171aa)
tripartite ATP-independent periplasmic transporter DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tripartite ATP-independent periplasmic transporter DctQ component id=14626320 bin=bin7_NC10_sister species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
tripartite AtP-independent periplasmic transporter subunit DctQ
13_2_20cm_scaffold_265_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

25000..26313
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00036E51BF
TRAP dicarboxylate transporter subunit DctM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_2_20cm_scaffold_265_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(26339..26992)
DNA (654bp) protein (218aa)
livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF id=14627183 bin=bin7_NC10_sister species=Afipia birgiae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF Tax=CSP1_6_Rokubacteria
ABC transporter ATP-binding protein
13_2_20cm_scaffold_265_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(26994..27749)
DNA (756bp) protein (252aa)
livG; ABC transporter id=14627182 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
livG; ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
branched-chain amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_265_29
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(27737..28663)
DNA (927bp) protein (309aa)
inner-membrane translocator Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
inner-membrane translocator id=14627181 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
livM; high-affinity branched-chain amino acid transport system permease livM
13_2_20cm_scaffold_265_30

Not on your lists

comp(28670..29503)
DNA (834bp) protein (278aa)
Branched-chain amino acid transport system permease protein n=1 Tax=uncultured prokaryote RepID=H5SIP5_9ZZZZ
Branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:BAL56031.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
braD; high-affinity branched-chain amino acid transport system permease BraD
Displaying items 1-30 of 39 in total

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