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13_2_20cm_scaffold_971

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_971_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..780)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD7_BRAJP
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
sugar ABC transporter substrate-binding protein
13_2_20cm_scaffold_971_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(889..1236)
DNA (348bp) protein (116aa)
id=14627642 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_971_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1236..2873)
DNA (1638bp) protein (546aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
medium-chain fatty-acid-CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] id=14625844 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
13_2_20cm_scaffold_971_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3055..5115
DNA (2061bp) protein (687aa)
short chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase id=3960006 bin=GWA2_Methylomirabilis_73_35 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
13_2_20cm_scaffold_971_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5120..6067
DNA (948bp) protein (316aa)
Luciferase family protein id=3859443 bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase family protein Tax=GWA2_Rokubacteria_70_23_curated
putative F420-dependent dehydrogenase
13_2_20cm_scaffold_971_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6078..6779
DNA (702bp) protein (234aa)
putative FMN reductase (EC:1.5.1.29); K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative FMN reductase (EC:1.5.1.29); K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] id=14625862 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10 rbh
putative FMN reductase (EC:1.5.1.29)
13_2_20cm_scaffold_971_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6793..7824
DNA (1032bp) protein (344aa)
glycosyl transferase group 1 protein Tax=GWA2_Rokubacteria_73_35_curated
Glycosyl transferase group 1 id=3859437 bin=GWF2_Methylomirabilis_70_14 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
glycosyl transferase group 1 protein
13_2_20cm_scaffold_971_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8094..8354
DNA (261bp) protein (87aa)
regulatory protein, FmdB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
regulatory protein, FmdB id=14627732 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
FmdB family regulatory protein
13_2_20cm_scaffold_971_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8351..9286
DNA (936bp) protein (312aa)
cellulose biosynthesis (CelD)-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3960018 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_2_20cm_scaffold_971_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9286..10551
DNA (1266bp) protein (422aa)
group 1 glycosyl transferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative glycosyltransferase id=4177827 bin=GWC2_Methylomirabilis_70_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
group 1 glycosyl transferase
13_2_20cm_scaffold_971_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10744..12687
DNA (1944bp) protein (648aa)
multi-sensor hybrid histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Multi-sensor hybrid histidine kinase id=4327907 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor hybrid histidine kinase
13_2_20cm_scaffold_971_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12747..13745
DNA (999bp) protein (333aa)
Putative ABC transporter id=3960022 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine microorganism HF4000_010I05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
oligopeptide/dipeptide ABC transporter ATPase
13_2_20cm_scaffold_971_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13742..14722
DNA (981bp) protein (327aa)
Uncharacterized protein id=3960025 bin=GWA2_Methylomirabilis_73_35 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
oligopeptide transport ATP-binding protein AppF-like Tax=GWA2_Rokubacteria_73_35_curated
oligopeptide ABC transporter ATP-binding protein
13_2_20cm_scaffold_971_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14795..16384
DNA (1590bp) protein (530aa)
ABC transporter substrate-binding protein id=4119976 bin=GWF2_Methylomirabilis_70_14 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate-binding protein
13_2_20cm_scaffold_971_15
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

16406..17359
DNA (954bp) protein (318aa)
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein id=14626482 bin=bin7_NC10_sister species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gsiC; glutathione transport system permease GsiC
13_2_20cm_scaffold_971_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17359..18258
DNA (900bp) protein (300aa)
Putative peptide ABC transporter permease protein id=3960111 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uncharacterized LOC100637730 Tax=GWA2_Rokubacteria_73_35_curated
gsiD; glutathione transport system permease GsiD
13_2_20cm_scaffold_971_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18388..18654
DNA (267bp) protein (89aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
7Fe ferredoxin id=14626484 bin=bin7_NC10_sister species=Microlunatus phosphovorus genus=Microlunatus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
fdxA; ferredoxin
13_2_20cm_scaffold_971_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18788..19012
DNA (225bp) protein (75aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
Sigma-54 dependent transcriptional regulator, Fis family id=3992856 bin=GWC2_Methylomirabilis_70_24 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_971_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19191..20246
DNA (1056bp) protein (352aa)
Acetyl-CoA acetyltransferase-like protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Acetyl-CoA acetyltransferase-like protein id=3960112 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Acetyl-CoA acetyltransferase-like protein
Displaying 19 items

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