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13_2_20cm_scaffold_63_28

Organism: 13_2_20CM_Rokubacteria_69_15_1

near complete RP 47 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38
Location: comp(21682..23175)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD-like; K03086 RNA polymerase primary sigma factor Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 499.0
  • Bit_score: 748
  • Evalue 4.40e-213
RNA polymerase sigma factor id=3388592 bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 516.0
  • Bit_score: 636
  • Evalue 1.70e-179
rpoD; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 528.0
  • Bit_score: 399
  • Evalue 1.30e-108

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGACATTCAGAGAAACTGCCCGCGACGCGGAACCCAGCATCACGGCCGTGGCTCCGGGCGGGCTTACTACCGCTGAGGAGCCTGAGACGCGGGTCGCCCTCGAAGAGGAAGCCGAGGAGACCCCGCGGCCAGAGCCAGTCGAGGCCGGCGCGTCTCCGCGCGGCGAGGACCCGGTTCGTCTTTACCTCAAAGAGATCGGCAAAGTCCCCCTGCTGACGGCCGCCCAAGAGGTGCAGATCGGCCGGCGCATCGAGGTTGGCCAGATCGCCCTCCGGCGTACGCTGGCCGGCATCCCGGTGGCCGTCACGACGCTTCTCGAAGTGGGCGACAAGCTTCGCCGCGGCGAGATCCCCGCCGACGACGTCATCGTCCTGGCCGAGGGCGGCGAGCTGGACGCCAAGGAGCTGCGGCCGGTGCTGCTGGCGTTCGGGCGACTTCGGAGGCTCGAGCGGAAGATCGCCCAGCTCAATGGTTCGCTCCGAGACAAGCGACAGTCGAAGACGAGCCGCGCCAGCCGAGGCAAGACGATCGCGGCGGCTCGCGAAAAGATCCAAAAGGTCGTCGCCGACATGCCCCTCAAGCCGGCGTTGATCGACGACATCGTGGCGCAAGTCCGCCGGCGCTGGGAGCGCATCGGCCAGCTCGCCGAAGAGGCTCGGCGGAACCGGACCGCCGCCGCCCGCGAGCTCTCCGAGCTCCAGAAGGAGGTCGGCCTGCCGCGCCGCCAGCTCAGCCAGTTCCTCGAGCAGATCGAGCGGAGCGACCGCACCGTGCGCCAGGCCAAGCGCGAGCTGATGGAGGCGAATCTTCGATTGGTCGTCTCGGTCGCCAAGCGCTACCTGGGCAGTGACCTGACGTTGCTCGACCTCGTCCAGGAAGGCAACATCGGGCTCATGAAGGCCGTCGACCGGTTCCAGTACCGCCGCGGCTTCAAGTTCTCGACGTACGCGACGTGGTGGATCCGCCAGGCCATCACCCGGGCGATCGCCGACCACTCGCGGACGATCCGGATCCCGGTCCACATGGTGGAGACGCTCAACCGCATCTCGCGCGTGAACCGGAACATGGTCAACGAGATCGGGCGCGAGCCGACGCCGGAGGAGCTCGCTCAACGCACGGGCGTCCCGTCGAAGAAGGTCCGACTCATCCTCGAGTCGTCGCGCAAGCCGCTGTCGCTCGAGACGCCGATCGGTGAAGACTCCGAGCTCGGCGATTTCCTCGAGGACAAGTCCGCCGGCTCGCCCAACGACTCGCTCCTCAACCAGGATCTGACGACGCAGATCGAGCGGGCCCTGTCCACGCTGTCGCCGAAGGAGAAGGAGATTCTGCGTCTCCGGTTCGGCATTGGCGAAGAGGGCGAGCACACCCTCGAGGAGGTCGGCAAGCGTTTCGCGGTCACCCGTGAGCGCATTCGGCAGATCGAGGCCAAGGCGCTCAGGAAGCTGCGCCACCCGCTGCGCGGCCGCAACCTCCGCGCCTTCGTCGAGAATTAG
PROTEIN sequence
Length: 498
MTFRETARDAEPSITAVAPGGLTTAEEPETRVALEEEAEETPRPEPVEAGASPRGEDPVRLYLKEIGKVPLLTAAQEVQIGRRIEVGQIALRRTLAGIPVAVTTLLEVGDKLRRGEIPADDVIVLAEGGELDAKELRPVLLAFGRLRRLERKIAQLNGSLRDKRQSKTSRASRGKTIAAAREKIQKVVADMPLKPALIDDIVAQVRRRWERIGQLAEEARRNRTAAARELSELQKEVGLPRRQLSQFLEQIERSDRTVRQAKRELMEANLRLVVSVAKRYLGSDLTLLDLVQEGNIGLMKAVDRFQYRRGFKFSTYATWWIRQAITRAIADHSRTIRIPVHMVETLNRISRVNRNMVNEIGREPTPEELAQRTGVPSKKVRLILESSRKPLSLETPIGEDSELGDFLEDKSAGSPNDSLLNQDLTTQIERALSTLSPKEKEILRLRFGIGEEGEHTLEEVGKRFAVTRERIRQIEAKALRKLRHPLRGRNLRAFVEN*