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13_2_20cm_scaffold_942

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_942_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1..2208
DNA (2208bp) protein (736aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000360E59E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_942_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

2279..3385
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000375A72D
von Willebrand factor, type A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
von Willebrand factor, type A
13_2_20cm_scaffold_942_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3606..4298)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E38E1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF39216.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_2_20cm_scaffold_942_4
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4390..4557)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B7CF5
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJL91036.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; H
alpha/beta hydrolase
13_2_20cm_scaffold_942_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4560..5315)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B7CF5
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:EAU67239.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigma
13_2_20cm_scaffold_942_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5365..5928)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ65_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88624.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_942_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6029..6868)
DNA (840bp) protein (280aa)
Alpha/beta hydrolase fold protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G738_GEOUR rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABQ27606.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter
13_2_20cm_scaffold_942_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6984..7496)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAH2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63007.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_2_20cm_scaffold_942_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7614..8171)
DNA (558bp) protein (186aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK9_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF43291.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_2_20cm_scaffold_942_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(8351..9625)
DNA (1275bp) protein (425aa)
diguanylate cyclase id=14431325 bin=bin3_NC10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_2_20cm_scaffold_942_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9895..10716
DNA (822bp) protein (274aa)
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFW7_TERRK
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG {ECO:0000313|EMBL:AFL88135.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus r
13_2_20cm_scaffold_942_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10761..13355)
DNA (2595bp) protein (865aa)
Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIM4_KORVE rbh
peptidase M1, membrane alanine aminopeptidase
Peptidase M1, membrane alanine aminopeptidase {ECO:0000313|EMBL:ABF43276.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
13_2_20cm_scaffold_942_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13412..14842
DNA (1431bp) protein (477aa)
TPR repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIM3_KORVE rbh
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABF43277.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_2_20cm_scaffold_942_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14851..15873)
DNA (1023bp) protein (341aa)
Radical SAM domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UP8_SOLUE rbh
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABJ86622.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usit
13_2_20cm_scaffold_942_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(15976..16671)
DNA (696bp) protein (232aa)
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13] Tax=RBG_16_Chloroflexi_68_14_curated
Aspartate racemase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEI5_KOSOT rbh
aspartate racemase
13_2_20cm_scaffold_942_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16698..17705)
DNA (1008bp) protein (336aa)
Adenosine deaminase {ECO:0000313|EMBL:ABF39050.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ABF39050.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
Adenosine deaminase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVQ0_KORVE
adenosine deaminase
13_2_20cm_scaffold_942_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17746..19347)
DNA (1602bp) protein (534aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVP9_KORVE
amino acid permease
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF39051.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.
13_2_20cm_scaffold_942_18
unknown

Not on your lists

comp(19452..19613)
DNA (162bp) protein (54aa)

This feature has no annotations

13_2_20cm_scaffold_942_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19634..22216)
DNA (2583bp) protein (861aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
ATP-dependent DNA helicase, Rep family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVP8_KORVE rbh
ATP-dependent DNA helicase Rep
13_2_20cm_scaffold_942_20
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(23415..23882)
DNA (468bp) protein (156aa)
fbP-2; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
peptidylprolyl isomerase
Peptidyl-prolyl cis-trans isomerase id=3297980 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
13_2_20cm_scaffold_942_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(23971..24348)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVC1_KORVE
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABF39179.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_2_20cm_scaffold_942_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24539..26746)
DNA (2208bp) protein (736aa)
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA {ECO:0000313|EMBL:ABF39180.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ABF39180.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acid
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVC0_KORVE rbh
(p)ppGpp synthetase SpoT/RelA
13_2_20cm_scaffold_942_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

26824..27756
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY35_RUBXD
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_942_24
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27802..28266
DNA (465bp) protein (155aa)
AraC family transcriptional regulator n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YL61_BDEBC
araC; araC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AFY00476.1}; TaxID=1069642 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source
13_2_20cm_scaffold_942_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28341..29537)
DNA (1197bp) protein (399aa)
Rdd n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVD4_KORVE
hypothetical protein
Rdd {ECO:0000313|EMBL:ABF39166.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_2_20cm_scaffold_942_26
unknown

Not on your lists

29657..29905
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_scaffold_942_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

29960..30526
DNA (567bp) protein (189aa)
Organic solvent tolerance protein OstA-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVD5_KORVE
organic solvent tolerance protein OstA-like protein
Organic solvent tolerance protein OstA-like protein {ECO:0000313|EMBL:ABF39165.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
13_2_20cm_scaffold_942_28
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

30538..30771
DNA (234bp) protein (78aa)
organic solvent tolerance protein OstA-like protein
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_2_20cm_scaffold_942_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

31000..31800
DNA (801bp) protein (267aa)
Organic solvent tolerance protein OstA-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVD5_KORVE
organic solvent tolerance protein OstA-like protein
Organic solvent tolerance protein OstA-like protein {ECO:0000313|EMBL:ABF39165.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
Displaying 29 items

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