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13_2_20cm_scaffold_2376

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2376_1
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330..542)
DNA (213bp) protein (71aa)
Sec-independent protein translocase protein TatA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECX2_9SPHN
preprotein translocase subunit TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
13_2_20cm_scaffold_2376_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(632..2542)
DNA (1911bp) protein (637aa)
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S0_SOLUE
selenocysteine-specific translation elongation factor SelB; K03833 selenocysteine-specific elongation factor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
selenocysteine-specific translation elongation factor SelB
13_2_20cm_scaffold_2376_3
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(2617..3255)
DNA (639bp) protein (213aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=PYRF_GEOLS
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KKT93708.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
13_2_20cm_scaffold_2376_4
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3340..3747)
DNA (408bp) protein (136aa)
Rare lipoprotein A n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9PV46_9CYAN
rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:AFY36988.1}; Flags: Precursor;; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC
13_2_20cm_scaffold_2376_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3837..4772)
DNA (936bp) protein (312aa)
Putative dihydroorotate dehydrogenase A (fumarate); Short=DHOD A;; Short=DHODase A;; Short=DHOdehase A;; EC=1.3.98.1;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Soli
Putative dihydroorotate dehydrogenase A (fumarate) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=PYRDA_SOLUE
dihydroorotate oxidase B, catalytic subunit
13_2_20cm_scaffold_2376_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5257..7059)
DNA (1803bp) protein (601aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12557407 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_2_20cm_scaffold_2376_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7172..7720
DNA (549bp) protein (183aa)
Uracil phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037CFDBF
13_2_20cm_scaffold_2376_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7770..8762
DNA (993bp) protein (331aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PYRB_PELCD
13_2_20cm_scaffold_2376_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

8749..10023
DNA (1275bp) protein (425aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
dihydroorotase (EC:3.5.2.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003772307
13_2_20cm_scaffold_2376_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10095..10979)
DNA (885bp) protein (295aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Phosphomethylpyrimidine kinase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKM4_9CLOT
phosphomethylpyrimidine kinase
13_2_20cm_scaffold_2376_11

Not on your lists

comp(11170..11340)
DNA (171bp) protein (57aa)
Glu/Leu/Phe/Val dehydrogenase {ECO:0000313|EMBL:EQD47423.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_2_20cm_scaffold_2376_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11340..12458)
DNA (1119bp) protein (373aa)
glutamate dehydrogenase; K00260 glutamate dehydrogenase [EC:1.4.1.2] Tax=RBG_16_Euryarchaeota_68_12_curated
NAD-specific glutamate dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1BJB3_9ZZZZ
Glu/Leu/Phe/Val dehydrogenase
13_2_20cm_scaffold_2376_13
unknown

Not on your lists

comp(12541..12852)
DNA (312bp) protein (104aa)

This feature has no annotations

13_2_20cm_scaffold_2376_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13104..14378)
DNA (1275bp) protein (425aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUQ4_KORVE
seryl-tRNA synthetase
13_2_20cm_scaffold_2376_15
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14470..15330)
DNA (861bp) protein (287aa)
epoxide hydrolase (EC:3.3.2.9)
Epoxide hydrolase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUT8_GRABC
alpha/beta hydrolase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
13_2_20cm_scaffold_2376_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16292..17824)
DNA (1533bp) protein (511aa)
Pilin, type IV, putative n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR96_KORVE
pilin, type IV Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
pilin, type IV
13_2_20cm_scaffold_2376_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17821..18375)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ54_CHLTF
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
sigma-70 family RNA polymerase sigma factor
13_2_20cm_scaffold_2376_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(18637..19980)
DNA (1344bp) protein (448aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=GLMM_SOLUE rbh
13_2_20cm_scaffold_2376_19
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20180..21250
DNA (1071bp) protein (357aa)
hypothetical protein Tax=CG_Delta_02
Putative uncharacterized protein id=2286985 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_2_20cm_scaffold_2376_20
Komagataeibacter rhaeticus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21324..22295
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371F55F
S1/P1 Nuclease {ECO:0000313|EMBL:KDU96626.1}; TaxID=1432055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter rha
S1/P1 nuclease
13_2_20cm_scaffold_2376_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22306..22776)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJF1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42999.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_2376_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22773..23666)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJF0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43000.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_2376_23
unknown

Not on your lists

23805..24110
DNA (306bp) protein (102aa)

This feature has no annotations

13_2_20cm_scaffold_2376_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(24576..25292)
DNA (717bp) protein (239aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Thiamine-phosphate synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJQ2_9BACT
thiamine-phosphate synthase
13_2_20cm_scaffold_2376_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(25252..25497)
DNA (246bp) protein (82aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_2376_26
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(25530..27053)
DNA (1524bp) protein (508aa)
Tetratricopeptide repeat protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF9_CHLTF
TPR repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_2_20cm_scaffold_2376_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(27094..28386)
DNA (1293bp) protein (431aa)
Tetratricopeptide repeat protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF9_CHLTF
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_2376_28
unknown

Not on your lists

28628..28780
DNA (153bp) protein (51aa)

This feature has no annotations

13_2_20cm_scaffold_2376_29
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(28787..29437)
DNA (651bp) protein (217aa)
RNase HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
RNase HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RNH2_SOLUE
13_2_20cm_scaffold_2376_30
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(29506..32151)
DNA (2646bp) protein (882aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y15_SOLUE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85450.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
Displaying items 1-30 of 33 in total

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