ggKbase home page

13_2_20cm_scaffold_3092

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3092_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3..701)
DNA (699bp) protein (233aa)
Fused response regulator of ato opeon, in two-component system with AtoS: response regulator sigma54 interaction protein n=1 Tax=mine drainage metagenome RepID=E6QIJ1_9ZZZZ
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Fis family transcriptional regulator
13_2_20cm_scaffold_3092_2
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1058..2065
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000379F4D6
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEU34426.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis
13_2_20cm_scaffold_3092_3
unknown

Not on your lists

2528..2671
DNA (144bp) protein (48aa)

This feature has no annotations

13_2_20cm_scaffold_3092_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2918..4297)
DNA (1380bp) protein (460aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
Aspartokinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1C3_CALAS
putative aspartokinase
13_2_20cm_scaffold_3092_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4495..6588
DNA (2094bp) protein (698aa)
Quinohemoprotein alcohol dehydrogenase ADH-IIG {ECO:0000312|EMBL:BAD99293.1}; Short=ADH IIG {ECO:0000303|PubMed:7730276};; EC=1.1.9.1 {ECO:0000269|PubMed:7730276};; Alcohol dehydrogenase (azurin) {ECO
Quinohemoprotein alcohol dehydrogenase ADH-IIG n=1 Tax=Pseudomonas putida RepID=QGDA_PSEPU
methanol/ethanol family PQQ-dependent dehydrogenase
13_2_20cm_scaffold_3092_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6636..8165
DNA (1530bp) protein (510aa)
Glycosyl hydrolase family, 32 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7Y1_ACIC5 rbh
glycosyl hydrolase family, 32
Glycosyl hydrolase family, 32 {ECO:0000313|EMBL:ACO33008.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (st
13_2_20cm_scaffold_3092_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8188..8559)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YTQ6_BDEBC
Uncharacterized protein {ECO:0000313|EMBL:CDM66296.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_2_20cm_scaffold_3092_8

Not on your lists

8916..10172
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037885E7
Uncharacterized protein {ECO:0000313|EMBL:CBH99489.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_3092_9

Not on your lists

10230..11177
DNA (948bp) protein (316aa)
carbohydrate kinase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B704FA
PfkB domain protein {ECO:0000313|EMBL:CBI06820.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sugar kinase
13_2_20cm_scaffold_3092_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11429..13687
DNA (2259bp) protein (753aa)
Sigma-54 dependent transcriptional regulator (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU6_9BACT
sigma-54 dependent transcriptional regulator
Sigma-54 dependent transcriptional regulator (Modular protein) {ECO:0000313|EMBL:CBK43183.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidat
13_2_20cm_scaffold_3092_11
unknown

Not on your lists

comp(14008..14565)
DNA (558bp) protein (186aa)

This feature has no annotations

13_2_20cm_scaffold_3092_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14949..16250
DNA (1302bp) protein (434aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U2_SOLUE
thiol oxidoreductase-like protein
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:ABJ83484.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.
13_2_20cm_scaffold_3092_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

16553..17863
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000361A470
OmpA/MotB domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
OmpA/MotB domain-containing protein
13_2_20cm_scaffold_3092_14
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

18047..18664
DNA (618bp) protein (206aa)
Dam-replacing family. (EC:3.1.21.4)
putative type II restriction endonuclease Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
Dam-replacing family id=3728807 bin=GWF2_Nitrospirae_44_13 species=Eubacterium rectale genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
13_2_20cm_scaffold_3092_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18806..19609
DNA (804bp) protein (268aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHZ3_KORVE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABF43507.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
13_2_20cm_scaffold_3092_16
unknown

Not on your lists

19815..20156
DNA (342bp) protein (114aa)

This feature has no annotations

Displaying 16 items

View Taxonomy