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13_2_20cm_scaffold_4003

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4003_1
unknown

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)

This feature has no annotations

13_2_20cm_scaffold_4003_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

607..1905
DNA (1299bp) protein (433aa)
Selenocysteine lyase n=1 Tax=Sphingobium sp. AP49 RepID=J2WWK8_9SPHN rbh
Aminotransferase {ECO:0000313|EMBL:KFD29601.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (
putative aminotransferase
13_2_20cm_scaffold_4003_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2013..3545
DNA (1533bp) protein (511aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=GWE1_Thiobacillus_62_9_curated
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Multi-sensor Signal Transduction Histidine Kinase id=1335687 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
13_2_20cm_scaffold_4003_4
unknown

Not on your lists

comp(3656..4291)
DNA (636bp) protein (212aa)

This feature has no annotations

13_2_20cm_scaffold_4003_5
Raphidiopsis brookii, Raphidiopsis, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4336..4737
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00036956FA
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=533247 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Raphidio
hypothetical protein
13_2_20cm_scaffold_4003_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4734..6509
DNA (1776bp) protein (592aa)
Membrane protein insertase YidC n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9G1_ACIC5
protein translocase subunit yidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
membrane protein
13_2_20cm_scaffold_4003_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6558..7088
DNA (531bp) protein (177aa)
Single-stranded nucleic acid binding R3H n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV79_KORVE
single-stranded nucleic acid binding R3H; K06346 spoIIIJ-associated protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
single-stranded nucleic acid binding R3H
13_2_20cm_scaffold_4003_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7127..8320)
DNA (1194bp) protein (398aa)
membrane-bound metal-dependent hydrolase; K09151 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Membrane-bound metal-dependent hydrolase id=4008959 bin=GWC2_Proteo_65_14_Ab886 species=Nitrosococcus watsonii genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
membrane-bound metal-dependent hydrolase
13_2_20cm_scaffold_4003_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8358..9320)
DNA (963bp) protein (321aa)
selenophosphate synthase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Selenophosphate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVJ6_KORVE
selenophosphate synthase
13_2_20cm_scaffold_4003_10
RAAC39, RAAC39, RAAC39, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9589..10062)
DNA (474bp) protein (158aa)
hypothetical protein id=720973 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
13_2_20cm_scaffold_4003_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

10228..10959
DNA (732bp) protein (244aa)
abortive infection protein; K07052 id=24476657 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Glaciecola pallidula genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
abortive infection protein; K07052 Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_2_20cm_scaffold_4003_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

10972..11637
DNA (666bp) protein (222aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RSMG_KORVE
methyltransferase GidB
13_2_20cm_scaffold_4003_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11792..12655
DNA (864bp) protein (288aa)
SpoOJ regulator protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJK7_9BACT
chromosome segregation ATPase; K03496 chromosome partitioning protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
chromosome segregation ATPase
13_2_20cm_scaffold_4003_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12597..13520
DNA (924bp) protein (308aa)
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family id=12554738 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
chromosome segregation DNA-binding protein
13_2_20cm_scaffold_4003_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13648..14061
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Putative uncharacterized protein id=3549586 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_4003_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14182..14481)
DNA (300bp) protein (100aa)
Rhomboid-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ33_KORVE
rhomboid-like protein
Rhomboid-like protein {ECO:0000313|EMBL:ABF41017.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_2_20cm_scaffold_4003_17
bacterium UASB270, Bacteria

Not on your lists

comp(14608..15309)
DNA (702bp) protein (234aa)
Rhomboid-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ33_KORVE
Rhomboid family protein {ECO:0000313|EMBL:GAK58280.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rhomboid-like protein
13_2_20cm_scaffold_4003_18
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

15448..16737
DNA (1290bp) protein (430aa)
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Phosphoribosylamine--glycine ligase id=2015846 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
phosphoribosylamine--glycine ligase
13_2_20cm_scaffold_4003_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

16742..17161
DNA (420bp) protein (140aa)
Molybdenum cofactor sulfurase domain containing protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FS14_STIAD
molybdenum cofactor sulfurase domain containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
molybdenum cofactor sulfurase domain containing protein
13_2_20cm_scaffold_4003_20
unknown

Not on your lists

comp(17179..18180)
DNA (1002bp) protein (334aa)

This feature has no annotations

13_2_20cm_scaffold_4003_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18394..18756
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MIW4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56248.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
13_2_20cm_scaffold_4003_22
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18828..19391
DNA (564bp) protein (188aa)
Pentapeptide repeat-containing protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KXZ3_HALAR
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:EMA24630.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula a
pentapeptide repeat-containing protein
13_2_20cm_scaffold_4003_23
unknown

Not on your lists

comp(19400..19909)
DNA (510bp) protein (170aa)

This feature has no annotations

13_2_20cm_scaffold_4003_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20013..22394
DNA (2382bp) protein (794aa)
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_70_23_curated
AMP-dependent synthetase and ligase id=3488728 bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_2_20cm_scaffold_4003_25
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22582..23148
DNA (567bp) protein (189aa)
OmpA family protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPR4_GRAMM
OmpA family protein
OmpA family protein {ECO:0000313|EMBL:AEU37153.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis
13_2_20cm_scaffold_4003_26
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(23247..24041)
DNA (795bp) protein (265aa)
Outer membrane transport energization protein TonB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE7_KORVE
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
TonB-like protein
13_2_20cm_scaffold_4003_27
unknown

Not on your lists

24397..24711
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_scaffold_4003_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24804..25133)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHF2_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43698.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_4003_29
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25267..26142)
DNA (876bp) protein (292aa)
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALY8_IGNAJ
Putative Rossmann fold nucleotide-binding protein; K06966 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Rossmann fold nucleotide-binding protein
13_2_20cm_scaffold_4003_30
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

26317..27471
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028Z6_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
Displaying items 1-30 of 32 in total

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