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13_2_20cm_scaffold_4613

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4613_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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113..544
DNA (432bp) protein (144aa)
PadR family transcripitonal regulator n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D0D12
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABF43285.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_4613_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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554..3202
DNA (2649bp) protein (883aa)
Permease n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIL9_9BACT
Permease {ECO:0000313|EMBL:EEF60282.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula
hypothetical protein
13_2_20cm_scaffold_4613_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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3337..4119
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIF8_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_4613_4
unknown

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4148..4255
DNA (108bp) protein (36aa)

This feature has no annotations

13_2_20cm_scaffold_4613_5
unknown

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comp(4389..4811)
DNA (423bp) protein (141aa)

This feature has no annotations

13_2_20cm_scaffold_4613_6
Neisseria sp. oral taxon 020, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4863..5600)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Neisseria sp. oral taxon 020 str. F0370 RepID=L1NJ67_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EKY03413.1}; TaxID=1127694 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sp. oral taxon 0
13_2_20cm_scaffold_4613_7
unknown

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comp(5712..5966)
DNA (255bp) protein (85aa)

This feature has no annotations

13_2_20cm_scaffold_4613_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6505..6909
DNA (405bp) protein (135aa)
rnr; ribonuclease R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=240015 species="Bacteria; Acidobacteria; Acido
Ribonuclease R n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8V5_ACIC5
13_2_20cm_scaffold_4613_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7048..7569)
DNA (522bp) protein (174aa)
Dihydrofolate reductase (EC:1.5.1.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382844B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_2_20cm_scaffold_4613_10
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8192..9352
DNA (1161bp) protein (387aa)
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
MFS transporter n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B79786
13_2_20cm_scaffold_4613_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9464..10804
DNA (1341bp) protein (447aa)
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
gltA; citrate synthase (EC:2.3.3.1) id=14430702 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
citrate synthase I (EC:2.3.3.1)
13_2_20cm_scaffold_4613_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

10902..11300
DNA (399bp) protein (133aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_2_20cm_scaffold_4613_13
unknown

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comp(11384..11719)
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying 13 items

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