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13_2_20cm_scaffold_89

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_89_1
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

123..3428
DNA (3306bp) protein (1102aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Zixibacteria_53_22_curated
DNA polymerase III, alpha subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWS3_9BACT rbh
DNA polymerase III catalytic subunit, DnaE type
13_2_20cm_scaffold_89_2
unknown

Not on your lists

3483..3803
DNA (321bp) protein (107aa)

This feature has no annotations

13_2_20cm_scaffold_89_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3842..4894
DNA (1053bp) protein (351aa)
transcriptional regulator n=1 Tax=Rhodococcus RepID=UPI00037ACC7B
DNA-binding protein HU / low-complexity, AKP-rich domain
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_89_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5522..8008
DNA (2487bp) protein (829aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF1_SOLUE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87419.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_89_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8031..8942)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM1_KORVE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF40479.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_89_6
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(9033..13418)
DNA (4386bp) protein (1462aa)
glutamate synthase [nadph] large chain (EC:1.4.1.13)
Glutamate synthase [nadph] large chain {ECO:0000313|EMBL:ACM05049.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ACM05049.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Th
Glutamate synthase [nadph] large chain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0N4_THERP
13_2_20cm_scaffold_89_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13516..14907)
DNA (1392bp) protein (464aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK34_KORVE
peptidase U62, modulator of DNA gyrase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_2_20cm_scaffold_89_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14904..16364)
DNA (1461bp) protein (487aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK33_KORVE
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_2_20cm_scaffold_89_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16506..17780)
DNA (1275bp) protein (425aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKD7_KORVE
S-adenosyl-L-homocysteine hydrolase
13_2_20cm_scaffold_89_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17885..19075)
DNA (1191bp) protein (397aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA3_CHLTF
13_2_20cm_scaffold_89_11
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19271..20032)
DNA (762bp) protein (254aa)
Peptide chain release factor 2 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F428_ACIC5
prfB; peptide chain release factor 2, programmed frameshift
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobact
13_2_20cm_scaffold_89_12
unknown

Not on your lists

20117..20380
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_89_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(20466..22058)
DNA (1593bp) protein (531aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Apolipoprotein N-acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP58_KORVE
apolipoprotein N-acyltransferase
13_2_20cm_scaffold_89_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22058..22729)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035FE692
sporulation/cell division repeat protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_89_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22732..23502)
DNA (771bp) protein (257aa)
SPFH domain, Band 7 family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R1_SOLUE
SPFH domain-containing protein/band 7 family protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_89_16
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(23528..24925)
DNA (1398bp) protein (466aa)
Nodulation efficiency protein NfeD n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R2_SOLUE
nodulation efficiency protein NfeD; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
nodulation efficiency protein NfeD
13_2_20cm_scaffold_89_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(24922..26517)
DNA (1596bp) protein (532aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INM1_KORVE
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_89_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26740..27579)
DNA (840bp) protein (280aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026S6_SOLUE
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ82993.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soliba
13_2_20cm_scaffold_89_19
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(27576..29654)
DNA (2079bp) protein (693aa)
1A family penicillin-binding protein (EC:2.4.1.129); K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
1A family penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026S5_SOLUE
13_2_20cm_scaffold_89_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(29593..30135)
DNA (543bp) protein (181aa)
1A family penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABJ82994.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABJ82994.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacte
Penicillin-binding protein, 1A family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026S5_SOLUE
13_2_20cm_scaffold_89_21
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(30258..30668)
DNA (411bp) protein (137aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Displaying 21 items

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