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13_2_20cm_scaffold_1335

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1335_1
unknown

Not on your lists

comp(3..674)
DNA (672bp) protein (224aa)

This feature has no annotations

13_2_20cm_scaffold_1335_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(817..1119)
DNA (303bp) protein (101aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_1335_3
R_NC10_66_22, NC10, Bacteria

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comp(1119..2780)
DNA (1662bp) protein (554aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE7_CONWI
13_2_20cm_scaffold_1335_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2796..3491)
DNA (696bp) protein (232aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Actinobacteria_68_12_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NL85_9FIRM
13_2_20cm_scaffold_1335_5
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

3494..3835
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036F2D32
hypothetical protein Tax=RBG_13_Aminicenantes_59_9_curated
13_2_20cm_scaffold_1335_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3880..5112)
DNA (1233bp) protein (411aa)
zinc-dependent protease, membrane associated (); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Actinobacteria_68_12_curated
Membrane-associated zinc metalloprotease n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPI5_KYRT2
membrane-associated zinc metalloprotease
13_2_20cm_scaffold_1335_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5216..6277)
DNA (1062bp) protein (354aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_16_Actinobacteria_68_12_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037D69B7
13_2_20cm_scaffold_1335_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6394..7191)
DNA (798bp) protein (266aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RBG_16_Actinobacteria_68_12_curated
Phosphatidate cytidylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
phosphatidate cytidylyltransferase
13_2_20cm_scaffold_1335_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7299..8033)
DNA (735bp) protein (245aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RBG_16_Actinobacteria_68_12_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW64_RUBXD
13_2_20cm_scaffold_1335_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8041..8601)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor; K02838 ribosome recycling factor Tax=RBG_16_Actinobacteria_68_12_curated
ribosome recycling factor
13_2_20cm_scaffold_1335_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8598..9383)
DNA (786bp) protein (262aa)
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Actinobacteria_68_12_curated
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Patulibacter medicamentivorans RepID=H0E781_9ACTN
13_2_20cm_scaffold_1335_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9383..10186)
DNA (804bp) protein (268aa)
Elongation factor Ts n=1 Tax=uncultured gamma proteobacterium RepID=H5SMG1_9GAMM
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RBG_16_Actinobacteria_68_12_curated
translation elongation factor Ts
13_2_20cm_scaffold_1335_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(10183..11061)
DNA (879bp) protein (293aa)
30S ribosomal protein S2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F075_CONWI
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Actinobacteria_68_12_curated
30S ribosomal protein S2
13_2_20cm_scaffold_1335_14

Not on your lists

11379..12329
DNA (951bp) protein (317aa)
Diguanylate cyclase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DAG4_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKM22626.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_2_20cm_scaffold_1335_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12299..13129)
DNA (831bp) protein (277aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RBG_16_Actinobacteria_68_12_curated
Pseudouridine synthase n=1 Tax=Patulibacter medicamentivorans RepID=H0E784_9ACTN
pseudouridine synthase
13_2_20cm_scaffold_1335_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13198..14085)
DNA (888bp) protein (296aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=RBG_16_Actinobacteria_68_12_curated
Lipoprotein signal peptidase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=LSPA_SYMTH
signal peptidase II
13_2_20cm_scaffold_1335_17
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14094..14273)
DNA (180bp) protein (60aa)
UPF0235 protein WQQ_16460 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZHY2_9GAMM
UPF0235 protein WQQ_16460 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydroc
hypothetical protein
13_2_20cm_scaffold_1335_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14392..14826)
DNA (435bp) protein (145aa)
DivIVA domain protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F8P5_DESDL
DivIVA domain; K04074 cell division initiation protein Tax=RBG_16_Actinobacteria_68_12_curated
DivIVA domain-containing protein
13_2_20cm_scaffold_1335_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14850..15158)
DNA (309bp) protein (103aa)
cell division protein ZapA n=1 Tax=Patulibacter americanus RepID=UPI0003B69585
hypothetical protein; K02221 YggT family protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_2_20cm_scaffold_1335_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15197..15757)
DNA (561bp) protein (187aa)
Cell division protein SepF n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F080_CONWI
hypothetical protein; K09772 cell division inhibitor SepF Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_2_20cm_scaffold_1335_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15771..16391)
DNA (621bp) protein (207aa)
Alanine racemase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F081_CONWI
alanine racemase; K06997 Tax=RBG_16_Actinobacteria_68_12_curated
alanine racemase
13_2_20cm_scaffold_1335_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16425..17138)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F082_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51942.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
13_2_20cm_scaffold_1335_23
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17135..19696)
DNA (2562bp) protein (854aa)
Polynucleotide adenylyltransferase region; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RBG_16_Actinobacteria_64_13_curated
Polynucleotide adenylyltransferase region n=1 Tax=Thermincola potens (strain JR) RepID=D5X7B9_THEPJ rbh
Polynucleotide adenylyltransferase region
13_2_20cm_scaffold_1335_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19711..20100)
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP id=4599718 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dfrA Tax=GWC2_Rokubacteria_70_16_curated
endoribonuclease L-PSP
13_2_20cm_scaffold_1335_25
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20093..20641)
DNA (549bp) protein (183aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NEP0_9FIRM
13_2_20cm_scaffold_1335_26
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20720..22552
DNA (1833bp) protein (611aa)
Serine proteases, subtilase family n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UC0_NITEU
serine protease
Serine proteases, subtilase family {ECO:0000313|EMBL:CAD85485.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitro
13_2_20cm_scaffold_1335_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22549..23859)
DNA (1311bp) protein (437aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F092_CONWI
UDP-N-acetylglucosamine1-carboxyvinyltransferase
13_2_20cm_scaffold_1335_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23883..24461
DNA (579bp) protein (193aa)
Metal dependent phosphohydrolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARW7_RUBXD
metal dependent phosphohydrolase Tax=RBG_16_Actinobacteria_68_12_curated
HDIG: uncharacterized domain HDIG
13_2_20cm_scaffold_1335_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24458..25537)
DNA (1080bp) protein (360aa)
Aminotransferase class V n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EC90_9CHLR
class V aminotransferase Tax=RBG_16_Actinobacteria_68_12_curated
L-cysteine/cystine lyase
13_2_20cm_scaffold_1335_30
unknown

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comp(25534..25617)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 30 items

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