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13_2_20cm_scaffold_378

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_378_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1..1431)
DNA (1431bp) protein (477aa)
SpoIID/LytB domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF26_CONWI
SpoIID/LytB domain-containing protein Tax=RBG_16_Actinobacteria_67_10_curated
SpoIID/LytB domain-containing protein
13_2_20cm_scaffold_378_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1579..2979
DNA (1401bp) protein (467aa)
Protein kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCN8_NOCSJ
protein kinase
Protein kinase {ECO:0000313|EMBL:ABL79573.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
13_2_20cm_scaffold_378_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2983..3969)
DNA (987bp) protein (329aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaeroba
dTDP-glucose 4,6-dehydratase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2D7_SPHTD
dTDP-glucose 4,6-dehydratase
13_2_20cm_scaffold_378_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4002..4688)
DNA (687bp) protein (229aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ADB54189.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ADB54189.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conex
dTDP-4-dehydrorhamnose reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Q8_CONWI
13_2_20cm_scaffold_378_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4778..5245)
DNA (468bp) protein (156aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_378_6
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(5242..5985)
DNA (744bp) protein (248aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=7200681 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
nucleotidyl transferase Tax=CG_Arma_02
13_2_20cm_scaffold_378_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6006..8180)
DNA (2175bp) protein (725aa)
Putative membrane protein mmpL3 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY27_THERP
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
putative membrane protein mmpL3
13_2_20cm_scaffold_378_8
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

8277..8714
DNA (438bp) protein (146aa)
heat shock protein Hsp20
Heat shock protein, Hsp20 family {ECO:0000313|EMBL:ACN99361.1}; TaxID=204536 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium azoren
13_2_20cm_scaffold_378_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8711..11116
DNA (2406bp) protein (802aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF86_CONWI rbh
13_2_20cm_scaffold_378_10
unknown

Not on your lists

11171..11575
DNA (405bp) protein (135aa)

This feature has no annotations

13_2_20cm_scaffold_378_11
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11710..13164)
DNA (1455bp) protein (485aa)
putative metalloendopeptidase (EC:3.4.24.-) Tax=RBG_16_Actinobacteria_64_13_curated
Peptidase M23 family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FQ91_9FIRM
metalloendopeptidase-like membrane protein
13_2_20cm_scaffold_378_12
unknown

Not on your lists

comp(13194..13583)
DNA (390bp) protein (130aa)

This feature has no annotations

13_2_20cm_scaffold_378_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13570..13965)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B415A8
hypothetical protein; K07090 Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_2_20cm_scaffold_378_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13965..14309)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E8X4_9ACTN
hypothetical protein; K07090 Tax=RBG_16_Actinobacteria_68_12_curated
permease
13_2_20cm_scaffold_378_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14322..15041
DNA (720bp) protein (240aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; C
Trehalose-phosphatase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2V2_CONWI
trehalose-phosphatase
13_2_20cm_scaffold_378_16
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15038..15754)
DNA (717bp) protein (239aa)
DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AEC1_CARHZ
two-component response regulator
Tax=BJP_08E140C01_Coriobacteriales_62_12
13_2_20cm_scaffold_378_17
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16781..17284
DNA (504bp) protein (168aa)
NUDIX hydrolase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMD0_THEM7
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADU51489.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobac
13_2_20cm_scaffold_378_18
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17368..17688)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJ47_CATAD
hypothetical protein
UPF0145 protein KALB_2300 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_2_20cm_scaffold_378_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17685..18986)
DNA (1302bp) protein (434aa)
aromatic amino acid decarboxylase; K01593 aromatic-L-amino-acid decarboxylase [EC:4.1.1.28] Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein id=24447211 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
aromatic amino acid decarboxylase
13_2_20cm_scaffold_378_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18983..20704)
DNA (1722bp) protein (574aa)
DNA-dependent DNA polymerase family X n=1 Tax=Patulibacter medicamentivorans RepID=H0E2J4_9ACTN rbh
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_16_Actinobacteria_68_12_curated
PHP domain-containing protein
13_2_20cm_scaffold_378_21
unknown

Not on your lists

20816..21505
DNA (690bp) protein (230aa)

This feature has no annotations

13_2_20cm_scaffold_378_22
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21502..22608
DNA (1107bp) protein (369aa)
Putative integral membrane protein {ECO:0000313|EMBL:AEV88197.1}; EC=2.4.1.- {ECO:0000313|EMBL:AEV88197.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Acti
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037434A7
hypothetical protein
13_2_20cm_scaffold_378_23
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22613..23329
DNA (717bp) protein (239aa)
Glycosyl transferase family 2 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHR5_ANASK
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACG73935.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
13_2_20cm_scaffold_378_24
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

23332..23667
DNA (336bp) protein (112aa)
LBCA THIOREDOXIN n=1 Tax=synthetic construct RepID=UPI00038A5F74
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
thioredoxin
13_2_20cm_scaffold_378_25
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23648..24109)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YJT5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD64693.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
oligopeptide transport system integral membrane protein
Displaying 25 items

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