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13_2_20cm_scaffold_4260

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4260_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
succinate dehydrogenase, subunit C; K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] Tax=RBG_16_Actinobacteria_68_12_curated
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase n=2 Tax=Sulfurihydrogenibium RepID=B2V7U6_SULSY
13_2_20cm_scaffold_4260_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(573..731)
DNA (159bp) protein (53aa)
succinate dehydrogenase, subunit C; K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_4260_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(728..1729)
DNA (1002bp) protein (334aa)
sdhB; succinate dehydrogenase/fumarate reductase Fe-s protein subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RBG_16_Actinobacteria_68_12_curated
sdhB; succinate dehydrogenase/fumarate reductase Fe-s protein subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] id=15193802 bin=GWC2_NOV_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
succinate dehydrogenase subunit B (EC:1.3.5.1)
13_2_20cm_scaffold_4260_4
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1729..3411)
DNA (1683bp) protein (561aa)
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=GWC2_Deltaproteobacteria_42_11_curated
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA31_9BACT
13_2_20cm_scaffold_4260_5
unknown

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comp(3469..3618)
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_4260_6
Thermus sp. 2.9, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3818..5416)
DNA (1599bp) protein (533aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PJG3_THESS
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_2_20cm_scaffold_4260_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5487..6083
DNA (597bp) protein (199aa)
GCN5-related N-acetyltransferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E4J2_9ACTN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHN11398.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patuli
acetyltransferase
13_2_20cm_scaffold_4260_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6118..6945
DNA (828bp) protein (276aa)
Tyrosine recombinase XerC n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B9_CONWI
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
13_2_20cm_scaffold_4260_9
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7175..8023
DNA (849bp) protein (283aa)
Tyrosine recombinase XerD n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKQ0_THEM7
tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source
13_2_20cm_scaffold_4260_10
unknown

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comp(8207..8701)
DNA (495bp) protein (165aa)

This feature has no annotations

13_2_20cm_scaffold_4260_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8698..9786)
DNA (1089bp) protein (363aa)
citrate (Si)-synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RBG_16_Actinobacteria_67_10_curated
citrate (Si)-synthase (EC:2.3.3.1)
citrate synthase n=1 Tax=Streptomyces prunicolor RepID=UPI000378EE2E
13_2_20cm_scaffold_4260_12
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

9843..10934
DNA (1092bp) protein (364aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41) Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000365B819
isocitrate/isopropylmalate dehydrogenase
13_2_20cm_scaffold_4260_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10955..11860
DNA (906bp) protein (302aa)
malate dehydrogenase (NAD) (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Actinobacteria_68_12_curated
Malate dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKN0_CHLTF
malate dehydrogenase, NAD-dependent
13_2_20cm_scaffold_4260_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12000..12764
DNA (765bp) protein (255aa)
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036D9B09
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_4260_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12829..13860
DNA (1032bp) protein (344aa)
Putative secreted protein containing a PDZ domain n=1 Tax=Brevibacillus sp. CF112 RepID=J2IE94_9BACL
PDZ/DHR/GLGF domain-containing protein; K07177 PDZ domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
ylbL; putative protein YlbL
13_2_20cm_scaffold_4260_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13983..14168
DNA (186bp) protein (62aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_4260_17
unknown

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14200..14457
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_scaffold_4260_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14422..15150)
DNA (729bp) protein (243aa)
Putative transcriptional regulator, GntR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L6_CONWI
transcriptional regulator of pyridoxine metabolism Tax=RBG_16_Actinobacteria_68_12_curated
GntR family transcriptional regulator
Displaying 18 items

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