ggKbase home page

13_2_20cm_scaffold_4670

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4670_1
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

192..1268
DNA (1077bp) protein (359aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Actinoplanes globisporus RepID=UPI000373B7F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL14516.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
13_2_20cm_scaffold_4670_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1281..2108
DNA (828bp) protein (276aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA25196.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA25196.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
sugar ABC transporter ATP-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B66BA2
13_2_20cm_scaffold_4670_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2105..3346
DNA (1242bp) protein (414aa)
ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B649BA
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABX06970.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aura
13_2_20cm_scaffold_4670_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3389..4093)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KSS1_STRRC
Uncharacterized protein {ECO:0000313|EMBL:KGI78855.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
13_2_20cm_scaffold_4670_5
unknown

Not on your lists

4919..5200
DNA (282bp) protein (94aa)

This feature has no annotations

13_2_20cm_scaffold_4670_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5321..6358
DNA (1038bp) protein (346aa)
putative 3-carboxymuconate cyclase id=24524035 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative 3-carboxymuconate cyclase Tax=RBG_16_RIF_WS3X_71_46_curated
putative 3-carboxymuconate cyclase
13_2_20cm_scaffold_4670_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

6507..6893
DNA (387bp) protein (129aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C719_SPHTD
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ACZ37780.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; S
13_2_20cm_scaffold_4670_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6911..7594
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PJW3_9ACTO
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EFH83086.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" so
oxidoreductase FAD/NAD(P)-binding domain-containing protein
13_2_20cm_scaffold_4670_9
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7587..7850
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Saccharopolyspora erythraea D RepID=T2RWC9_SACER
Uncharacterized protein {ECO:0000313|EMBL:EQD83529.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea
hypothetical protein
13_2_20cm_scaffold_4670_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8015..8971
DNA (957bp) protein (319aa)
Phosphotransferase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDA4_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66606.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
hypothetical protein
13_2_20cm_scaffold_4670_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9105..10106
DNA (1002bp) protein (334aa)
Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9S7_SPHTD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACZ40570.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.
13_2_20cm_scaffold_4670_12
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

10140..10796
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Volvox carteri RepID=D8U0Z1_VOLCA
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ46466.1}; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carte
serine/threonine protein kinase
13_2_20cm_scaffold_4670_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11060..12058)
DNA (999bp) protein (333aa)
methylenetetrahydromethanopterin reductase; K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBN9_9CHLR
putative luciferase-like monooxygenase
Displaying 13 items

View Taxonomy