ggKbase home page

13_2_20cm_scaffold_490

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_490_1
unknown

Not on your lists

3..86
DNA (84bp) protein (28aa)

This feature has no annotations

13_2_20cm_scaffold_490_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(71..364)
DNA (294bp) protein (98aa)
hydroxyisourate hydrolase; K07127 5-hydroxyisourate hydrolase [EC:3.5.2.17] Tax=RBG_16_Actinobacteria_68_12_curated
5-hydroxyisourate hydrolase n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DJR4_9NOCA
5-Hydroxyisourate Hydrolase
13_2_20cm_scaffold_490_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(361..1683)
DNA (1323bp) protein (441aa)
hydroxydechloroatrazine ethylaminohydrolase; K03382 hydroxyatrazine ethylaminohydrolase [EC:3.5.99.3] id=24441029 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hydroxydechloroatrazine ethylaminohydrolase; K03382 hydroxyatrazine ethylaminohydrolase [EC:3.5.99.3] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Cytosine deaminase and related metal-dependent hydrolase
13_2_20cm_scaffold_490_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1680..3398)
DNA (1719bp) protein (573aa)
ade; adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B55181
ade; adenine deaminase
13_2_20cm_scaffold_490_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3448..4239
DNA (792bp) protein (264aa)
xanthine dehydrogenase (EC:1.17.1.4)
Putative xanthine dehydrogenase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQK9_MODMB
FAD-binding molybdopterin dehydrogenase protein Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_490_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4236..4691
DNA (456bp) protein (152aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RBG_16_Actinobacteria_68_12_curated
carbon-monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CML3_PSEUX
13_2_20cm_scaffold_490_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4688..6928
DNA (2241bp) protein (747aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABG05751.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABG05751.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria;
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS77_RUBXD
13_2_20cm_scaffold_490_8
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6854..7858)
DNA (1005bp) protein (335aa)
membrane protein n=1 Tax=Streptomyces somaliensis RepID=UPI000299D112
Membrane protein {ECO:0000313|EMBL:KJY20231.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
membrane protein
13_2_20cm_scaffold_490_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7900..8175
DNA (276bp) protein (92aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_490_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8177..8626)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FS98_9DELT
hypothetical protein; K09936 hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_2_20cm_scaffold_490_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

8666..9481
DNA (816bp) protein (272aa)
enoyl-CoA hydratase/isomerase; K01661 naphthoate synthase [EC:4.1.3.36] id=24418702 bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacillus fordii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
enoyl-CoA hydratase/isomerase; K01661 naphthoate synthase [EC:4.1.3.36] Tax=RBG_16_Armatimonadetes_67_12_curated
enoyl-CoA hydratase/isomerase
13_2_20cm_scaffold_490_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9562..10239
DNA (678bp) protein (226aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5E5_CONWI
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADB50612.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
13_2_20cm_scaffold_490_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10336..11376)
DNA (1041bp) protein (347aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1C0_CONWI
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADB52083.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibact
13_2_20cm_scaffold_490_14
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11461..12432)
DNA (972bp) protein (324aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Frankia sp. QA3 RepID=I9KMU4_9ACTO
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EIV95658.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
peptidase S1 and S6 chymotrypsin/Hap
13_2_20cm_scaffold_490_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12488..13258
DNA (771bp) protein (257aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=RBG_16_Actinobacteria_68_12_curated
Enoyl-CoA hydratase/isomerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5E6_CONWI
enoyl-CoA hydratase/isomerase
13_2_20cm_scaffold_490_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13279..13878
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8X9_CONWI
putative transmembrane protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_2_20cm_scaffold_490_17
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

13972..14421
DNA (450bp) protein (150aa)
LuxR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B63590
signal transduction histidine kinase Tax=RBG_13_Planctomycetes_60_9_curated
LuxR family transcriptional regulator
13_2_20cm_scaffold_490_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14365..14670)
DNA (306bp) protein (102aa)
Phenylacetate-CoA oxygenase, PaaJ subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C842_SPHTD
phenylacetate-CoA oxygenase, PaaJ subunit; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD Tax=RBG_16_Actinobacteria_68_12_curated
phenylacetate-CoA oxygenase, PaaJ subunit
Displaying 18 items

View Taxonomy