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13_2_20cm_scaffold_185

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_185_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)
hypothetical protein id=12555433 bin=CNBR_ACIDO species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_2_20cm_scaffold_185_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(117..926)
DNA (810bp) protein (270aa)
Aldo/keto reductase n=1 Tax=mine drainage metagenome RepID=T1CE66_9ZZZZ
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
aldo/keto reductase
13_2_20cm_scaffold_185_3
unknown

Not on your lists

974..1861
DNA (888bp) protein (296aa)

This feature has no annotations

13_2_20cm_scaffold_185_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1877..2995)
DNA (1119bp) protein (373aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein; K01739 cystathionine gamma-synthase [EC:2.5.1.48] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNU9_MARHT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_2_20cm_scaffold_185_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3222..4292)
DNA (1071bp) protein (357aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) id=14626074 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
13_2_20cm_scaffold_185_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4289..5533)
DNA (1245bp) protein (415aa)
Histidine kinase (EC:2.7.13.3)
multi-sensor signal transduction histidine kinase id=14626073 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
multi-sensor signal transduction histidine kinase Tax=CSP1_6_Rokubacteria
13_2_20cm_scaffold_185_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5523..6188)
DNA (666bp) protein (222aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K01996 branched-chain amino acid transport system ATP-binding protein id=14626072 bin=bin7_NC10_sister species=Streptomyces scabrisporus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Fe(3+)-transporting ATPase (EC:3.6.3.30); K01996 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_185_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6169..6882)
DNA (714bp) protein (238aa)
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like); K01995 branched-chain amino acid transport system ATP-binding protein id=14626071 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like); K01995 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
braF1; high-affinity branched-chain amino acid transport ATP-binding protein BraF
13_2_20cm_scaffold_185_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6887..7807)
DNA (921bp) protein (307aa)
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport system permease protein LivM id=1703884 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter
13_2_20cm_scaffold_185_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7834..8763)
DNA (930bp) protein (310aa)
Branched-chain amino acid ABC-type transport system, permease components id=2644245 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
High-affinity branched-chain amino acid transport system permease protein LivH
13_2_20cm_scaffold_185_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8709..9959)
DNA (1251bp) protein (417aa)
ABC-type branched-chain amino acid transport systems id=1703886 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC-type branched-chain amino acid transport systems; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-type branched-chain amino acid transport systems
13_2_20cm_scaffold_185_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9988..10995)
DNA (1008bp) protein (336aa)
Luciferase-like monooxygenase id=2589433 bin=GWA2_Methylomirabilis_73_35 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like protein
13_2_20cm_scaffold_185_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10992..11510)
DNA (519bp) protein (173aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625184 bin=bin7_NC10_sister species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_185_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11503..12654)
DNA (1152bp) protein (384aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase id=1703889 bin=GWA2_Methylomirabilis_73_35 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_185_15
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12651..13172)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T2W6_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY57603.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (s
13_2_20cm_scaffold_185_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13181..15262)
DNA (2082bp) protein (694aa)
acyl-CoA synthetase (NDP forming); K09181 hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
CoA-binding protein id=14626532 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
acetyl coenzyme A synthetase alpha domain-containing protein
13_2_20cm_scaffold_185_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15264..16529)
DNA (1266bp) protein (422aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase id=1703891 bin=GWA2_Methylomirabilis_73_35 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_185_18
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(16606..17667)
DNA (1062bp) protein (354aa)
Quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Glucose sorbosone dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ4_9BACT
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:BAL58140.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_2_20cm_scaffold_185_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17850..18359
DNA (510bp) protein (170aa)
id=3864200 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3864200 Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_scaffold_185_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18395..19105)
DNA (711bp) protein (237aa)
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) id=1703893 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F)
13_2_20cm_scaffold_185_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19105..19872)
DNA (768bp) protein (256aa)
ABC transporter related id=1703894 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
branched-chain amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_185_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19869..21032)
DNA (1164bp) protein (388aa)
putative branched chain amino acid ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4849842 bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched chain amino acid ABC transporter substrate-binding protein
13_2_20cm_scaffold_185_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21135..22052)
DNA (918bp) protein (306aa)
Hypothetical conserved protein id=1703896 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_2_20cm_scaffold_185_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(22052..22903)
DNA (852bp) protein (284aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Inner-membrane translocator id=4849840 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid ABC transporter permease
13_2_20cm_scaffold_185_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22936..23523)
DNA (588bp) protein (196aa)
4-vinyl reductase 4VR id=4254241 bin=GWC2_Methylomirabilis_70_24 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
4-vinyl reductase 4VR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_185_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23520..24629)
DNA (1110bp) protein (370aa)
Opine dehydrogenase (EC:1.5.1.28) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Opine dehydrogenase (EC:1.5.1.28)
NAD-dependent glycerol-3-phosphate dehydrogenase-like protein id=1703904 bin=GWA2_Methylomirabilis_73_35 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_185_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24626..25819)
DNA (1194bp) protein (398aa)
Formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase id=1703945 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_185_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25819..26904)
DNA (1086bp) protein (362aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4)
Xanthine dehydrogenase id=4849835 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_185_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(26938..27234)
DNA (297bp) protein (99aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4) Tax=GWC2_Rokubacteria_70_16_curated
Xanthine dehydrogenase id=4849835 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Displaying 29 items

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