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13_2_20cm_scaffold_2477

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2477_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..689
DNA (687bp) protein (229aa)
qor1; NADPH:quinone reductase (EC:1.6.5.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
qor1; NADPH:quinone reductase (EC:1.6.5.5)
Zn-dependent alcohol dehydrogenases id=4202594 bin=GWC2_Methylomirabilis_70_16 species=uncultured nuHF2 cluster bacterium HF0770_42C12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_2477_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(686..1456)
DNA (771bp) protein (257aa)
enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
luciferase-like monooxygenase id=4793474 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Carnitinyl-CoA dehydratase
13_2_20cm_scaffold_2477_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1628..2791
DNA (1164bp) protein (388aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Rokubacteria_70_16_curated
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase id=4412861 bin=GWF2_Methylomirabilis_70_14 species=Phyllobacterium sp. YR531 genus=Phyllobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_2477_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2788..3924
DNA (1137bp) protein (379aa)
L-carnitine dehydratase/bile acid-inducible protein F id=4412851 bin=GWF2_Methylomirabilis_70_14 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yfdE; L-carnitine dehydratase/bile acid-inducible protein F Tax=GWA2_Rokubacteria_70_23_curated
L-carnitine dehydratase/bile acid-inducible protein F
13_2_20cm_scaffold_2477_5
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3921..4454
DNA (534bp) protein (178aa)
Chromate transporter n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S008_THEOJ
chromate transporter
Chromate transporter {ECO:0000313|EMBL:ADL08785.1}; Flags: Precursor;; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis
13_2_20cm_scaffold_2477_6
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

4451..4972
DNA (522bp) protein (174aa)
Chromate transporter n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKM1_METTR
chromate transporter; K07240 chromate transporter Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
chromate transport protein
13_2_20cm_scaffold_2477_7
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4969..5508)
DNA (540bp) protein (180aa)
Amino acid transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PCN9_9DELT
amino acid permease family protein Tax=RBG_16_Chloroflexi_58_14_curated
amino acid permease
13_2_20cm_scaffold_2477_8
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5496..6245)
DNA (750bp) protein (250aa)
amino acid permease family protein Tax=RBG_16_Chloroflexi_58_14_curated
Amino acid transporter id=2876962 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
amino acid transporter
13_2_20cm_scaffold_2477_9
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6624..6995
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002EBA96F
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AFY34690.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
13_2_20cm_scaffold_2477_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7095..7826
DNA (732bp) protein (244aa)
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWA2_Rokubacteria_73_35_curated
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RluA family pseudouridine synthase
13_2_20cm_scaffold_2477_11
unknown

Not on your lists

8085..8306
DNA (222bp) protein (74aa)

This feature has no annotations

13_2_20cm_scaffold_2477_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8281..9417)
DNA (1137bp) protein (379aa)
DEAD/DEAH box helicase domain protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AHG91795.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=4400730 bin=GWF2_Methylomirabilis_70_14 species=uncultured Aminicenantes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2477_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9592..10368
DNA (777bp) protein (259aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4221618 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_2477_14
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10337..11806)
DNA (1470bp) protein (490aa)
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Uncharacterized protein id=4950952 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein of unknown function DUF112 transmembrane
13_2_20cm_scaffold_2477_15
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11803..12252)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPX8_9CLOT
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
13_2_20cm_scaffold_2477_16
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12254..13207)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00038096FC
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69329.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
hypothetical protein
13_2_20cm_scaffold_2477_17
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13204..14271)
DNA (1068bp) protein (356aa)
Alcohol dehydrogenase superfamily, zinc-containing n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG84_MOOTA rbh
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69330.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
alcohol dehydrogenase
13_2_20cm_scaffold_2477_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

14456..15619
DNA (1164bp) protein (388aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=14627653 bin=bin7_NC10_sister species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
branched chain amino acid ABC transporter periplasmic ligand-binding protein
13_2_20cm_scaffold_2477_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15636..16397
DNA (762bp) protein (254aa)
Inner-membrane translocator id=2845224 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
13_2_20cm_scaffold_2477_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16394..16852
DNA (459bp) protein (153aa)
livM; putative ABC transport system, membrane protein id=14627651 bin=bin7_NC10_sister species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
livM; putative ABC transport system, membrane protein Tax=CSP1_6_Rokubacteria
inner-membrane translocator
13_2_20cm_scaffold_2477_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16816..17337
DNA (522bp) protein (174aa)
livM; putative ABC transport system, membrane protein Tax=CSP1_6_Rokubacteria
livM; putative ABC transport system, membrane protein id=14627651 bin=bin7_NC10_sister species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
livM; putative ABC transport system, membrane protein
13_2_20cm_scaffold_2477_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17334..18089
DNA (756bp) protein (252aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein id=4427436 bin=GWC2_Methylomirabilis_70_24 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter-like protein
13_2_20cm_scaffold_2477_23
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18086..18232
DNA (147bp) protein (49aa)
Branched-chain amino acid ABC transporter ATPase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0ELX1_9BURK
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:EOA06655.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;"
livF; branched-chain amino acid ABC transporter ATPase
Displaying 23 items

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