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13_2_20cm_scaffold_359

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Displaying items 1-30 of 76 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_359_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..75
DNA (75bp) protein (25aa)
putative multicopper oxidase, type 2 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
13_2_20cm_scaffold_359_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86..652
DNA (567bp) protein (189aa)
Electron transport protein SCO1/SenC n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3ISK3_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
13_2_20cm_scaffold_359_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(616..1869)
DNA (1254bp) protein (418aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative substrate-binding ABC transporter protein
13_2_20cm_scaffold_359_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1920..2984
DNA (1065bp) protein (355aa)
chaperone DnaJ domain-containing protein; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chaperone protein DnaJ id=3111262 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
chaperone DnaJ domain-containing protein
13_2_20cm_scaffold_359_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2995..5613
DNA (2619bp) protein (873aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=14628005 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10 rbh
clpB; chaperone
13_2_20cm_scaffold_359_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5644..6429
DNA (786bp) protein (262aa)
sugar phosphate permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Major facilitator superfamily MFS_1 id=2304903 bin=GWA2_Methylomirabilis_73_35 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator transporter
13_2_20cm_scaffold_359_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6369..6881
DNA (513bp) protein (171aa)
Major facilitator superfamily MFS_1 id=2304903 bin=GWA2_Methylomirabilis_73_35 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar phosphate permease Tax=GWA2_Rokubacteria_73_35_curated
sugar phosphate permease
13_2_20cm_scaffold_359_8
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6898..7770
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4561
Uncharacterized protein {ECO:0000313|EMBL:EAQ81818.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
13_2_20cm_scaffold_359_9
unknown

Not on your lists

8282..8377
DNA (96bp) protein (32aa)

This feature has no annotations

13_2_20cm_scaffold_359_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8382..9131
DNA (750bp) protein (250aa)
Integral membrane protein TerC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC43_9BACT
integral membrane protein TerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
YjbE family integral membrane protein
13_2_20cm_scaffold_359_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9064..10827)
DNA (1764bp) protein (588aa)
gamma-glutamyltranspeptidase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative gamma-glutamyltranspeptidase id=2304933 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gamma-glutamyltranspeptidase
13_2_20cm_scaffold_359_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10834..11565
DNA (732bp) protein (244aa)
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Predicted glutamine amidotransferases Tax=GWA2_Rokubacteria_73_35_curated
peptidase C26
13_2_20cm_scaffold_359_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11582..12436)
DNA (855bp) protein (285aa)
metallo-beta-lactamase family-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Metallo-beta-lactamase superfamily protein id=4401260 bin=GWC2_Methylomirabilis_70_24 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
blaB; metallo-beta-lactamase family protein
13_2_20cm_scaffold_359_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12445..13155)
DNA (711bp) protein (237aa)
putative ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) id=2304938 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter-like protein
13_2_20cm_scaffold_359_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13158..13919)
DNA (762bp) protein (254aa)
UPI000297112C related cluster id=2304939 bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
sugar ABC transporter ATPase Tax=GWA2_Rokubacteria_73_35_curated
livG4; branched-chain amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_359_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14028..14978)
DNA (951bp) protein (317aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Inner-membrane translocator id=2751017 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
amino acid ABC transporter
13_2_20cm_scaffold_359_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14975..15844)
DNA (870bp) protein (290aa)
amino acid ABC transporter Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC-type transporter, integral membrane subunit id=4137668 bin=GWF2_Methylomirabilis_70_14 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
amino acid ABC transporter
13_2_20cm_scaffold_359_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15939..17153)
DNA (1215bp) protein (405aa)
Extracellular ligand-binding receptor id=4401190 bin=GWC2_Methylomirabilis_70_24 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
extracellular ligand-binding receptor
13_2_20cm_scaffold_359_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(17181..17606)
DNA (426bp) protein (142aa)
putative 4-hydroxybenzoyl-CoA thioesterase; K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
4-hydroxybenzoyl-CoA thioesterase id=4401184 bin=GWC2_Methylomirabilis_70_24 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
thioesterase superfamily protein
13_2_20cm_scaffold_359_20
unknown

Not on your lists

17884..18099
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_359_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19050..19871)
DNA (822bp) protein (274aa)
NUDIX hydrolase id=4464477 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_359_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19912..20355)
DNA (444bp) protein (148aa)
Putative uncharacterized protein id=4900341 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=GWA2_Rokubacteria_73_35_curated
pyridoxamine 5'-phosphate oxidase
13_2_20cm_scaffold_359_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(20382..21518)
DNA (1137bp) protein (379aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Butyryl-CoA dehydrogenase id=4464474 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_scaffold_359_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(21531..22727)
DNA (1197bp) protein (399aa)
Acyl-CoA dehydrogenase domain protein id=4696833 bin=GWC2_Methylomirabilis_70_16 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
acyl-CoA dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_scaffold_359_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22821..24062
DNA (1242bp) protein (414aa)
hydantoinase/carbamoylase amidase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
amidase, hydantoinase/carbamoylase family (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family id=4464472 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_359_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24123..25124
DNA (1002bp) protein (334aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=GWA2_Rokubacteria_73_35_curated
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 id=4464471 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_359_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

25141..27564
DNA (2424bp) protein (808aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=GWA2_Rokubacteria_73_35_curated
ctaD; cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase, subunit I id=4464470 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_359_28
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

27564..27863
DNA (300bp) protein (100aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=4464469 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome C oxidase subunit IV
13_2_20cm_scaffold_359_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

27860..28597
DNA (738bp) protein (246aa)
ctaG; putative CtaG protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative CtaG protein id=4464468 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
13_2_20cm_scaffold_359_30
unknown

Not on your lists

28712..28915
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying items 1-30 of 76 in total

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