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13_2_20cm_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_376_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..1208
DNA (1206bp) protein (402aa)
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=2413346 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_376_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1221..1610
DNA (390bp) protein (130aa)
Putative fluoride ion transporter CrcB n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGD5_ANADF
camphor resistance protein CrcB; K06199 CrcB protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
camphor resistance protein CrcB
13_2_20cm_scaffold_376_3
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1614..2525)
DNA (912bp) protein (304aa)
Putative oxidoreductase n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QYT8_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:GAB17989.1}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
luciferase-like protein
13_2_20cm_scaffold_376_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2525..3370)
DNA (846bp) protein (282aa)
Putative beta-lactamase id=4412858 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. S23321 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative beta-lactamase Tax=GWC2_Rokubacteria_70_16_curated
beta-lactamase
13_2_20cm_scaffold_376_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3378..4058
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627130 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_376_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4055..4891
DNA (837bp) protein (279aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_376_7
unknown

Not on your lists

5084..5275
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_376_8
unknown

Not on your lists

5373..5996
DNA (624bp) protein (208aa)

This feature has no annotations

13_2_20cm_scaffold_376_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5993..6367
DNA (375bp) protein (125aa)
putative ring-cleavage extradiol dioxygenase id=14627127 bin=bin7_NC10_sister species=Haloterrigena thermotolerans genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
putative ring-cleavage extradiol dioxygenase Tax=CSP1_6_Rokubacteria
13_2_20cm_scaffold_376_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6524..6967
DNA (444bp) protein (148aa)
Tripartite tricarboxylate transporter TctB family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tripartite tricarboxylate transporter TctB family id=2413341 bin=GWA2_Methylomirabilis_73_35 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_376_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6978..7205
DNA (228bp) protein (76aa)
Putative uncharacterized protein id=2413340 bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_376_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7205..8458
DNA (1254bp) protein (418aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627123 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_376_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8455..9435
DNA (981bp) protein (327aa)
Protein bugT-like protein id=2413339 bin=GWA2_Methylomirabilis_73_35 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
protein bugT Tax=GWA2_Rokubacteria_73_35_curated
protein bugT
13_2_20cm_scaffold_376_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9484..10032
DNA (549bp) protein (183aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) id=14627121 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88)
13_2_20cm_scaffold_376_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10036..10389
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2413287 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_376_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10386..11048
DNA (663bp) protein (221aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627119 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_376_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11042..11872
DNA (831bp) protein (277aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2413285 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_2_20cm_scaffold_376_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11898..13151
DNA (1254bp) protein (418aa)
peptidase M48 Ste24p Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M48, Ste24p id=2413284 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative Zn-dependent protease
13_2_20cm_scaffold_376_19
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13301..15007
DNA (1707bp) protein (569aa)
Family 3 adenylate cyclase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CBM0_DESTA
Sensor histidine kinase {ECO:0000313|EMBL:EKE99434.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
family 3 adenylate cyclase
13_2_20cm_scaffold_376_20
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14974..15513)
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=404589 species="Bac
Inorganic pyrophosphatase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HD90_ANADF
inorganic diphosphatase
13_2_20cm_scaffold_376_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15564..16298
DNA (735bp) protein (245aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627117 bin=bin7_NC10_sister species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_376_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16295..17458
DNA (1164bp) protein (388aa)
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] Tax=GWA2_Rokubacteria_70_23_curated
FAD dependent oxidoreductase id=3080366 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
FAD dependent oxidoreductase
13_2_20cm_scaffold_376_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17530..18528
DNA (999bp) protein (333aa)
TRAP transporter, solute receptor (TAXI family protein); K07080 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP transporter, solute receptor (TAXI family protein) id=4102358 bin=GWC2_Methylomirabilis_70_16 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP transporter, solute receptor (TAXI family protein)
13_2_20cm_scaffold_376_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18536..20344
DNA (1809bp) protein (603aa)
TRAP transporter 4TM/12TM fusion protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP transporter, 4TM/12TM fusion protein id=3970258 bin=GWC2_Methylomirabilis_70_16 species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
TRAP transporter 4TM/12TM fusion protein
13_2_20cm_scaffold_376_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

20394..20930
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8K5_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40148.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_2_20cm_scaffold_376_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20879..21265)
DNA (387bp) protein (129aa)
mutT; mutator protein MutT (EC:3.6.1.-); K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=GWA2_Rokubacteria_73_35_curated
mutT; mutator protein MutT (EC:3.6.1.-)
Mutator MutT protein id=4996876 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_376_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21235..21924)
DNA (690bp) protein (230aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] id=14627033 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_376_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22019..22972
DNA (954bp) protein (318aa)
glycine cleavage system t protein (EC:2.1.2.10); K06980 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4996873 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
folate-binding protein YgfZ
13_2_20cm_scaffold_376_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22985..24997
DNA (2013bp) protein (671aa)
hypothetical protein; K06888 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4996873 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_376_30
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24984..25706)
DNA (723bp) protein (241aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQ61_ALLVD
exsB protein
Displaying items 1-30 of 47 in total

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