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13_2_20cm_scaffold_430

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_430_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1..909
DNA (909bp) protein (303aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
btuB; TonB-dependent outer membrane receptor for cobalamin and Fe transport; K02014 iron complex outermembrane recepter protein id=14627283 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
TonB-dependent receptor
13_2_20cm_scaffold_430_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

919..1575
DNA (657bp) protein (219aa)
Uncharacterized conserved protein id=2285119 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_430_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1572..2519
DNA (948bp) protein (316aa)
TonB family protein id=2285121 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TonB family protein; K03832 periplasmic protein TonB Tax=GWA2_Rokubacteria_73_35_curated
TonB family protein
13_2_20cm_scaffold_430_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2576..3094
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV92_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37147.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_2_20cm_scaffold_430_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3091..4605
DNA (1515bp) protein (505aa)
cbiP; adenosylcobyric acid synthase (glutamine-hydrolyzing) (EC:6.3.5.10); K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=GWA2_Rokubacteria_73_35_curated
cbiP; adenosylcobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase id=2285123 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_430_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4692..5525
DNA (834bp) protein (278aa)
cobalamin biosynthesis protein CobD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalamin biosynthesis protein CobD id=2285125 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cbiB; cobalamin biosynthesis protein CbiB
13_2_20cm_scaffold_430_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5888..6616
DNA (729bp) protein (243aa)
Sporulation and cell division repeat protein id=2285129 bin=GWA2_Methylomirabilis_73_35 species=Xanthomonas fragariae genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
cell division protein
13_2_20cm_scaffold_430_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6600..7166
DNA (567bp) protein (189aa)
putative bifunctional protein tilS/hprT; K15780 bifunctional protein TilS/HprT [EC:6.3.4.19 2.4.2.8] Tax=GWA2_Rokubacteria_73_35_curated
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Putative bifunctional protein tilS/hprT id=2285131 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_430_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7634..9001
DNA (1368bp) protein (456aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH id=2610206 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_430_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9132..9923
DNA (792bp) protein (264aa)
Dihydropteroate synthase id=3047315 bin=GWF2_Methylomirabilis_70_14 species=Thermogladius cellulolyticus genus=Thermogladius taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydropteroate synthase Tax=GWA2_Rokubacteria_70_23_curated
dihydropteroate synthase
13_2_20cm_scaffold_430_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9920..10738
DNA (819bp) protein (273aa)
Putative uncharacterized protein id=4773679 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_scaffold_430_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10738..11406
DNA (669bp) protein (223aa)
YbbR family protein id=4773678 bin=GWC2_Methylomirabilis_70_16 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
YbbR family protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_scaffold_430_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11403..12755
DNA (1353bp) protein (451aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase id=4870787 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_430_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12752..13216
DNA (465bp) protein (155aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Holo-[acyl-carrier-protein] synthase id=4773676 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
holo-acyl-carrier-protein synthase
13_2_20cm_scaffold_430_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13194..13946
DNA (753bp) protein (251aa)
id=4870785 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4870785 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_430_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13948..15501
DNA (1554bp) protein (518aa)
yjeF; carbohydrate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein yjeF id=4773674 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
yjeF; carbohydrate kinase
13_2_20cm_scaffold_430_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15498..15935
DNA (438bp) protein (146aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein family UPF0079, ATPase id=4773673 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_430_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16005..16670
DNA (666bp) protein (222aa)
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA repair protein RadC; K03630 DNA repair protein RadC id=14627930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
DNA repair protein RadC
13_2_20cm_scaffold_430_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16730..16858
DNA (129bp) protein (43aa)
putative glyoxalase; K07104 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_430_20
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(16865..17107)
DNA (243bp) protein (81aa)
id=14627932 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
id=4430353 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_430_21
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(17471..18463)
DNA (993bp) protein (331aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14627933 bin=bin7_NC10_sister species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
dihydroorotate dehydrogenase (EC:1.3.98.1)
13_2_20cm_scaffold_430_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18515..19303
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14627958 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_430_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19303..20232
DNA (930bp) protein (310aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lipid A biosynthesis acyltransferase id=4785123 bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
lipid A biosynthesis acyltransferase
13_2_20cm_scaffold_430_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20222..21391
DNA (1170bp) protein (390aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=3713931 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_430_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21388..22179
DNA (792bp) protein (264aa)
beta-ketoacyl synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable 3-oxoacyl-[acyl-carrier-protein] synthase II id=3713929 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces violaceusniger genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative 3-oxoacyl-ACP synthase I
13_2_20cm_scaffold_430_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22187..22462
DNA (276bp) protein (92aa)
hypothetical protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K02078 acyl carrier protein id=14627962 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_430_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22459..23589
DNA (1131bp) protein (377aa)
Beta-ketoacyl synthase id=3713926 bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-ketoacyl synthase Tax=GWC2_Rokubacteria_70_16_curated
3-oxoacyl-(acyl-carrier-protein) synthase 2
13_2_20cm_scaffold_430_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23586..24602
DNA (1017bp) protein (339aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-ketoacyl synthase id=3870372 bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AuaD protein
13_2_20cm_scaffold_430_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24599..25678
DNA (1080bp) protein (360aa)
Glycosyltransferase involved in cell wall biogenesis (EC:2.4.-.-)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyltransferase involved in cell wall biogenesis id=3870373 bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_430_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

25675..26946
DNA (1272bp) protein (424aa)
monooxygenase FAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Flavin-dependent dehydrogenase id=2980067 bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying items 1-30 of 41 in total

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