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13_2_20cm_scaffold_656

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_656_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..574)
DNA (573bp) protein (191aa)
mvaB; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] Tax=GWA2_Rokubacteria_73_35_curated
mvaB; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
hydroxymethylglutaryl-CoA lyase id=14627904 bin=bin7_NC10_sister species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_656_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

749..1366
DNA (618bp) protein (206aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
13_2_20cm_scaffold_656_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1404..2570)
DNA (1167bp) protein (389aa)
mmgC1; acyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase id=1924172 bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mmgC1; acyl-CoA dehydrogenase
13_2_20cm_scaffold_656_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2573..3361)
DNA (789bp) protein (263aa)
fadB; enoyl CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Enoyl CoA hydratase id=1924174 bin=GWA2_Methylomirabilis_73_35 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fadB; enoyl CoA hydratase
13_2_20cm_scaffold_656_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3358..4545)
DNA (1188bp) protein (396aa)
Formyl-CoA transferase (EC:2.8.3.16) Tax=GWA2_Rokubacteria_73_35_curated
Formyl-CoA transferase id=1924176 bin=GWA2_Methylomirabilis_73_35 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein C7orf10
13_2_20cm_scaffold_656_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4737..5309
DNA (573bp) protein (191aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_656_7
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5774..6487
DNA (714bp) protein (238aa)
Class II Aldolase/Adducin Family Protein n=1 Tax=Pseudomonas sp. UW4 RepID=K9NGT4_9PSED
Aldolase {ECO:0000313|EMBL:KJK05884.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;"
Class II Aldolase/Adducin Family Protein
13_2_20cm_scaffold_656_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6484..7512)
DNA (1029bp) protein (343aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14626695 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=CSP1_6_Rokubacteria
methionine synthase, vitamin-B12 independent
13_2_20cm_scaffold_656_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7512..8219)
DNA (708bp) protein (236aa)
ABC transporter ATP-binding protein I; K01996 branched-chain amino acid transport system ATP-binding protein id=14626694 bin=bin7_NC10_sister species=Afipia birgiae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein I; K01996 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
ABC transporter ATP-binding protein I
13_2_20cm_scaffold_656_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8219..8977)
DNA (759bp) protein (253aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter related protein id=4923983 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
13_2_20cm_scaffold_656_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8974..9921)
DNA (948bp) protein (316aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14626692 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
13_2_20cm_scaffold_656_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9918..10778)
DNA (861bp) protein (287aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Inner-membrane translocator id=4923979 bin=GWC2_Methylomirabilis_70_16 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
13_2_20cm_scaffold_656_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10816..12087)
DNA (1272bp) protein (424aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport systems, periplasmic component id=4923977 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twin-arginine translocation pathway signal protein
13_2_20cm_scaffold_656_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12213..13064
DNA (852bp) protein (284aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
putative phytochrome sensor protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative phytochrome sensor protein
Displaying 14 items

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