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13_2_20cm_scaffold_246

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_246_1

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comp(462..1019)
DNA (558bp) protein (186aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RNA polymerase sigma-70 factor
13_2_20cm_scaffold_246_2
unknown

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comp(1003..1626)
DNA (624bp) protein (208aa)

This feature has no annotations

13_2_20cm_scaffold_246_3
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1801..2385
DNA (585bp) protein (195aa)
phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
Phosphoheptose isomerase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEM1_TERRK
13_2_20cm_scaffold_246_4
unknown

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2563..2811
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_scaffold_246_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3385..3705
DNA (321bp) protein (107aa)
Preprotein translocase, YajC subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U9_9BACT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDY18152.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
yajC; preprotein translocase subunit YajC
13_2_20cm_scaffold_246_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3735..6122
DNA (2388bp) protein (796aa)
Protein-export membrane protein SecD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U8_9BACT rbh
Protein-export membrane protein SecD {ECO:0000313|EMBL:EDY18151.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
secD; preprotein translocase subunit SecD
13_2_20cm_scaffold_246_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6235..6432
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI2_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
30S ribosomal protein S21
13_2_20cm_scaffold_246_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6511..8049)
DNA (1539bp) protein (513aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH6_9BACT
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EDY22214.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
uroporphyrin-III C-methyltransferase
13_2_20cm_scaffold_246_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8036..8995)
DNA (960bp) protein (320aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthonio
Porphobilinogen deaminase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X7_9BACT
hemC; porphobilinogen deaminase
13_2_20cm_scaffold_246_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9045..10115)
DNA (1071bp) protein (357aa)
glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Glutamyl-tRNA reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN62_9BACT
glutamyl-tRNA reductase
13_2_20cm_scaffold_246_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10112..10906)
DNA (795bp) protein (265aa)
Cytochrome c assembly protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X5_9BACT
Cytochrome c assembly protein {ECO:0000313|EMBL:EDY18178.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
cytochrome C biogenesis protein
13_2_20cm_scaffold_246_12
unknown

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11017..11961
DNA (945bp) protein (315aa)

This feature has no annotations

13_2_20cm_scaffold_246_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11986..12573
DNA (588bp) protein (196aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Q0_9BACT
13_2_20cm_scaffold_246_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12694..15465
DNA (2772bp) protein (924aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU94_9BACT
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00049024}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
glnD; UTP:GlnB (protein PII) uridylyltransferase
13_2_20cm_scaffold_246_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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15511..16263
DNA (753bp) protein (251aa)
Nucleotidyl transferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D758_9BACT
Nucleotidyl transferase {ECO:0000313|EMBL:EDY17709.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
13_2_20cm_scaffold_246_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(16328..16747)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIH5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43062.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_scaffold_246_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(16759..17532)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D641_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDY18244.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_246_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17627..18184)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D640_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18243.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_246_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(18257..19198)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D638_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18241.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_246_20

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comp(20161..20985)
DNA (825bp) protein (275aa)
hypothetical protein
Tetratricopeptide repeat {ECO:0000313|EMBL:AIA10985.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 20 items

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