ggKbase home page

13_2_20cm_scaffold_442

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_442_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13..1491
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D060_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20374.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gldG; ABC transporter
13_2_20cm_scaffold_442_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1493..3382
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D059_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20373.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_442_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3456..4199)
DNA (744bp) protein (248aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacte
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D058_9BACT
ubiquinone/menaquinone biosynthesis methyltransferase
13_2_20cm_scaffold_442_4
unknown

Not on your lists

comp(4436..4747)
DNA (312bp) protein (104aa)

This feature has no annotations

13_2_20cm_scaffold_442_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4971..5849)
DNA (879bp) protein (293aa)
Tetratricopeptide repeat family protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV56_SYNAS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_2_20cm_scaffold_442_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5856..6359)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4J3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18446.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_442_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6356..7612)
DNA (1257bp) protein (419aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4J4_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY18447.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
nrfG; TPR repeats containing protein
13_2_20cm_scaffold_442_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7758..8636
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D330_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY19141.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_442_9
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(8631..9458)
DNA (828bp) protein (276aa)
his2; Histidinol phosphatase, PHP family; K04486 histidinol-phosphatase (PHP family) [EC:3.1.3.15] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036221B2
his2; Histidinol phosphatase, PHP family
13_2_20cm_scaffold_442_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9484..10086)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20702.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_442_11
unknown

Not on your lists

comp(10076..10174)
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_scaffold_442_12
Verrucomicrobium spinosum, Verrucomicrobium, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10259..10561
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174502C
13_2_20cm_scaffold_442_13
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10568..11608
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174502B
Peptidase M23 {ECO:0000313|EMBL:CDD96635.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akke
peptidase M23
13_2_20cm_scaffold_442_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11637..12119)
DNA (483bp) protein (161aa)
molybdenum cofactor biosynthesis protein Mog n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468B1
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:EEF61051.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosp
molybdenum cofactor synthesis protein
13_2_20cm_scaffold_442_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12119..12523)
DNA (405bp) protein (135aa)
molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468B0
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EEF61050.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
moaC; molybdenum cofactor biosynthesis protein MoaC
13_2_20cm_scaffold_442_16
unknown

Not on your lists

12548..12919
DNA (372bp) protein (124aa)

This feature has no annotations

13_2_20cm_scaffold_442_17
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

12950..13576
DNA (627bp) protein (209aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_2_20cm_scaffold_442_18

Not on your lists

13643..14080
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BA8
Marine sediment metagenome DNA, contig: S01H1_S31404 {ECO:0000313|EMBL:GAG40446.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_2_20cm_scaffold_442_19

Not on your lists

14206..14691
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BA8
Marine sediment metagenome DNA, contig: S01H1_S31404 {ECO:0000313|EMBL:GAG40446.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_2_20cm_scaffold_442_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14695..16164
DNA (1470bp) protein (490aa)
UbiD family decarboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D171_9BACT
UbiD family decarboxylase {ECO:0000313|EMBL:EDY20083.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase
13_2_20cm_scaffold_442_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16275..16664)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D170_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20082.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_442_22
unknown

Not on your lists

comp(16778..17119)
DNA (342bp) protein (114aa)

This feature has no annotations

13_2_20cm_scaffold_442_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17155..18003)
DNA (849bp) protein (283aa)
squalene synthase (EC:2.5.1.32)
Squalene/phytoene synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D169_9BACT
Squalene/phytoene synthase {ECO:0000313|EMBL:EDY20081.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_442_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18029..19207)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D167_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20079.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_442_25
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19301..20392)
DNA (1092bp) protein (364aa)
lepB; Signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Signal peptidase I n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXV1_9BACT
lepB; Signal peptidase I
13_2_20cm_scaffold_442_26
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20526..21980)
DNA (1455bp) protein (485aa)
Elongation factor 4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZN7_9BACT
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
GTP-binding protein LepA
13_2_20cm_scaffold_442_27
unknown

Not on your lists

22438..23181
DNA (744bp) protein (248aa)

This feature has no annotations

13_2_20cm_scaffold_442_28
unknown

Not on your lists

23171..23416
DNA (246bp) protein (82aa)

This feature has no annotations

13_2_20cm_scaffold_442_29

Not on your lists

comp(23403..24263)
DNA (861bp) protein (287aa)
TPR repeat-containing protein n=1 Tax=uncultured bacterium 253 RepID=E3T735_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_442_30
unknown

Not on your lists

24294..24467
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 30 items

View Taxonomy