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13_2_20cm_scaffold_11038

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_11038_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15..290
DNA (276bp) protein (92aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXU8_HERA2
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
two component transcriptional regulator
13_2_20cm_scaffold_11038_2
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(334..1113)
DNA (780bp) protein (260aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibriona
CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JWV2_DESFR
protein TolA
13_2_20cm_scaffold_11038_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1151..2071)
DNA (921bp) protein (307aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid aminotransferase id=3949866 bin=GWC2_Methylomirabilis_70_16 species=Vibrio splendidus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
branched-chain amino acid aminotransferase
13_2_20cm_scaffold_11038_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

2172..3638
DNA (1467bp) protein (489aa)
rnb; exoribonuclease II (EC:3.1.13.1)
Putative exoribonuclease II {ECO:0000313|EMBL:CBE67911.1}; EC=3.1.13.1 {ECO:0000313|EMBL:CBE67911.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="C
Putative exoribonuclease II n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM25_9BACT rbh
13_2_20cm_scaffold_11038_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3682..4107)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=5032665 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_11038_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4146..5132)
DNA (987bp) protein (329aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Deoxyhypusine synthase id=2432286 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
deoxyhypusine synthase
13_2_20cm_scaffold_11038_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5137..5931)
DNA (795bp) protein (265aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sora
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZE6_SORCE rbh
hypothetical protein
13_2_20cm_scaffold_11038_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6660..6932
DNA (273bp) protein (91aa)
Enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enoyl-CoA hydratase/isomerase id=3776764 bin=GWA2_Methylomirabilis_73_35 species=Rhodomicrobium vannielii genus=Rhodomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Enoyl-CoA hydratase/isomerase
13_2_20cm_scaffold_11038_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6917..8017
DNA (1101bp) protein (367aa)
L-sorbosone dehydrogenase id=4768386 bin=GWC2_Methylomirabilis_70_24 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
L-sorbosone dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
L-sorbosone dehydrogenase
13_2_20cm_scaffold_11038_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8205..8702)
DNA (498bp) protein (166aa)
MOSC domain containing protein id=3776762 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_11038_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8712..9293)
DNA (582bp) protein (194aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3776761 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
toluene tolerance Ttg2 superfamily protein
13_2_20cm_scaffold_11038_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9293..9481)
DNA (189bp) protein (63aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3776760 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_11038_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9640..10053)
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14625221 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_11038_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10423..11052
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3776755 bin=GWA2_Methylomirabilis_73_35 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
predicted permease
13_2_20cm_scaffold_11038_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11052..11552
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037870E9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_2_20cm_scaffold_11038_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

11570..11914
DNA (345bp) protein (115aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_2_20cm_scaffold_11038_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

11959..12540
DNA (582bp) protein (194aa)
signAl transduction histidine kinase containing a receiver domain id=14627170 bin=bin7_NC10_sister species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
signAl transduction histidine kinase containing a receiver domain Tax=CSP1_6_Rokubacteria
hypothetical protein
13_2_20cm_scaffold_11038_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

12670..12957
DNA (288bp) protein (96aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=4539026 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_11038_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13138..13965
DNA (828bp) protein (276aa)
Radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=3597633 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
radical SAM protein
Displaying 19 items

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