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13_2_20cm_scaffold_1112

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1112_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..994
DNA (993bp) protein (331aa)
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA mismatch repair protein MutL id=4853965 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA mismatch repair protein MutL
13_2_20cm_scaffold_1112_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1425..1940
DNA (516bp) protein (172aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWA2_Rokubacteria_73_35_curated
tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=4853966 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1112_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1937..3226
DNA (1290bp) protein (430aa)
GTP-binding protein HflX; K03665 GTP-binding protein HflX Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GTPase HflX id=4853967 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein HflX
13_2_20cm_scaffold_1112_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3238..3810
DNA (573bp) protein (191aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4853968 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=GWA2_Rokubacteria_73_35_curated
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
13_2_20cm_scaffold_1112_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3788..5113
DNA (1326bp) protein (442aa)
Putative uncharacterized protein id=4853969 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
PDZ domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1112_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5127..6491
DNA (1365bp) protein (455aa)
GTPase Der id=4853970 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
small GTP-binding protein domain-containing protein; K03977 GTP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ribosome-associated GTPase EngA
13_2_20cm_scaffold_1112_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6533..7354
DNA (822bp) protein (274aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4853971 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1112_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7362..8279
DNA (918bp) protein (306aa)
uncharacterized LOC100215998 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Blr0521 protein id=4853972 bin=GWA2_Methylomirabilis_73_35 species=Tropheryma whipplei genus=Tropheryma taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sporulation domain-containing protein
13_2_20cm_scaffold_1112_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8289..8570
DNA (282bp) protein (94aa)
histone family protein DNA-binding protein; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integration host factor, alpha subunit id=4853973 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ihfA-1; integration host factor subunit alpha
13_2_20cm_scaffold_1112_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8639..8932
DNA (294bp) protein (98aa)
MerR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, MerR family id=4853974 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MerR family transcriptional regulator
13_2_20cm_scaffold_1112_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9060..9839
DNA (780bp) protein (260aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] Tax=GWA2_Rokubacteria_73_35_curated
5'-nucleotidase SurE id=4853975 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
surE; 5'(3')-nucleotidase/polyphosphatase
13_2_20cm_scaffold_1112_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9839..10495
DNA (657bp) protein (219aa)
protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protein-L-isoaspartate O-methyltransferase 1 id=4853976 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein-L-isoaspartate O-methyltransferase
13_2_20cm_scaffold_1112_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10715..10969
DNA (255bp) protein (85aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Acylphosphatase id=4853977 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acylphosphatase
13_2_20cm_scaffold_1112_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10966..11772
DNA (807bp) protein (269aa)
peptidase M23B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NlpD; membrane protein id=14626518 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
peptidase M23B
13_2_20cm_scaffold_1112_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11765..12109
DNA (345bp) protein (115aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=4853978 bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RpoD subfamily RNA polymerase sigma-70 subunit
Displaying 15 items

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