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13_2_20cm_scaffold_1114

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1114_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..692)
DNA (690bp) protein (230aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) Tax=GWA2_Rokubacteria_73_35_curated
GTP cyclohydrolase I id=4681943 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Hypothetical protein
13_2_20cm_scaffold_1114_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(677..1093)
DNA (417bp) protein (139aa)
pts; 6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase id=4681942 bin=GWA2_Methylomirabilis_73_35 species=Gracilibacillus halophilus genus=Gracilibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1114_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1093..1503)
DNA (411bp) protein (137aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4534447 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1114_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1500..2552)
DNA (1053bp) protein (351aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=4681940 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_2_20cm_scaffold_1114_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2562..3344)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Enoyl-CoA hydratase/isomerase id=4681939 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase
13_2_20cm_scaffold_1114_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3372..3800)
DNA (429bp) protein (143aa)
id=14626280 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626280 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_1114_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3813..5390)
DNA (1578bp) protein (526aa)
Hydrogenase, large subunit-like protein (HycE-like) id=3938369 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hydrogenase, large subunit-like protein (HycE-like) Tax=GWA2_Rokubacteria_70_23_curated
hydrogenase, large subunit-like protein (HycE-like)
13_2_20cm_scaffold_1114_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5387..6844)
DNA (1458bp) protein (486aa)
hyfF; hydrogenase-4 component F (EC:1.-.-.-) Tax=GWA2_Rokubacteria_70_23_curated
hyfF; hydrogenase-4 component F (EC:1.-.-.-)
Hydrogenase-4 component F id=3938372 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_1114_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6855..7511)
DNA (657bp) protein (219aa)
Uncharacterized protein id=3938429 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_1114_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7518..8462)
DNA (945bp) protein (315aa)
Similar to membrane-bound [NiFe]-hydrogenase-3, subunit D id=3938430 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D Tax=GWA2_Rokubacteria_70_23_curated
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D
13_2_20cm_scaffold_1114_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8459..10480)
DNA (2022bp) protein (674aa)
Uncharacterized protein id=3938431 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_1114_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10549..10962)
DNA (414bp) protein (138aa)
HycG protein id=3938433 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hycG; hycG protein Tax=GWA2_Rokubacteria_70_23_curated
hycG; hycG protein
13_2_20cm_scaffold_1114_13
unknown

Not on your lists

11307..11498
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_1114_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11510..12229
DNA (720bp) protein (240aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14626359 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_2_20cm_scaffold_1114_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12283..12615)
DNA (333bp) protein (111aa)
lipoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lipoprotein id=14626358 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lipoprotein
13_2_20cm_scaffold_1114_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12655..14109)
DNA (1455bp) protein (485aa)
glpC; ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glpC; ferredoxin id=14626356 bin=bin7_NC10_sister species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
putative fe-S oxidoreductase
Displaying 16 items

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