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13_2_20cm_scaffold_13714

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_13714_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..213
DNA (213bp) protein (71aa)
h16_A2129; Zn-dependent hydrolase id=14625954 bin=bin7_NC10_sister species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
h16_A2129; Zn-dependent hydrolase Tax=CSP1_6_Rokubacteria
hypothetical protein
13_2_20cm_scaffold_13714_2
unknown

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comp(263..367)
DNA (105bp) protein (35aa)

This feature has no annotations

13_2_20cm_scaffold_13714_3
CSP1_5_NC10, NC10, Bacteria

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comp(392..1198)
DNA (807bp) protein (269aa)
hypothetical protein id=14430724 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_2_20cm_scaffold_13714_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1252..1653)
DNA (402bp) protein (134aa)
putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, Crp/Fnr family id=4555508 bin=GWC2_Methylomirabilis_70_16 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Crp/Fnr family transcriptional regulator
13_2_20cm_scaffold_13714_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1709..2056)
DNA (348bp) protein (116aa)
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hslR; Hsp15 family heat shock protein; K04762 ribosome-associated heat shock protein Hsp15 id=14627276 bin=bin7_NC10_sister species=Leucobacter sp. UCD-THU genus=Leucobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
hslR; ribosome-associated heat shock protein
13_2_20cm_scaffold_13714_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2110..2805
DNA (696bp) protein (232aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1709660 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_13714_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2802..3455
DNA (654bp) protein (218aa)
id=14627273 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627273 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_13714_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3571..4437)
DNA (867bp) protein (289aa)
Putative lipoprotein id=1709658 bin=GWA2_Methylomirabilis_73_35 species=Teredinibacter turnerae genus=Teredinibacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipoprotein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_13714_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4782..6404)
DNA (1623bp) protein (541aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=GWA2_Rokubacteria_70_23_curated
Gamma-glutamyltransferase id=3249133 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
gamma-glutamyltransferase
13_2_20cm_scaffold_13714_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(6415..7206)
DNA (792bp) protein (264aa)
Binding-protein-dependent transport systems inner membrane component id=4626990 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC di/oligopeptide transporter, inner membrane subunit Tax=RBG_16_NC10_65_8_curated
peptide/nickel transport system permease protein
13_2_20cm_scaffold_13714_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(7308..8219)
DNA (912bp) protein (304aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4626993 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus sp. BC25 genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2
Displaying 11 items

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