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13_2_20cm_scaffold_1637

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1637_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..578)
DNA (576bp) protein (192aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CP92_VARPS
TRAP C4-dicarboxylate transport system permease DctM Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TRAP dicarboxylate transporter subunit DctM
13_2_20cm_scaffold_1637_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(575..1249)
DNA (675bp) protein (225aa)
Putative membrane protein id=4900378 bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative transporter dctQ related transmembrane protein Tax=GWA2_Rokubacteria_73_35_curated
transporter dctQ related transmembrane protein
13_2_20cm_scaffold_1637_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1320..2450)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein id=4900379 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1637_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2565..3266)
DNA (702bp) protein (234aa)
protease Do (EC:3.4.21.108) id=14625822 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
htrA; periplasmic serine protease Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
protease Do
13_2_20cm_scaffold_1637_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3263..3901)
DNA (639bp) protein (213aa)
lon3; ATP-dependent protease La; K07157 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lon3; ATP-dependent protease La; K07157 id=14625820 bin=bin7_NC10_sister species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lon3; ATP-dependent protease La
13_2_20cm_scaffold_1637_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3906..5015)
DNA (1110bp) protein (370aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Mrp id=4554975 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
sodium:proton antiporter
13_2_20cm_scaffold_1637_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5101..5586
DNA (486bp) protein (162aa)
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
flavin reductase domain-containing protein id=14625818 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative oxidoreductase
13_2_20cm_scaffold_1637_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5583..6698
DNA (1116bp) protein (372aa)
lpsC; perosamine synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DegT/DnrJ/EryC1/StrS aminotransferase id=4600877 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aminotransferase
13_2_20cm_scaffold_1637_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6698..7816
DNA (1119bp) protein (373aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Glycosyl transferase, group 1 id=4334274 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
group 1 glycosyl transferase
13_2_20cm_scaffold_1637_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7813..9039
DNA (1227bp) protein (409aa)
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lipid A export ATP-binding/permease protein MsbA id=4600885 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phospholipid-lipopolysaccharide ABC transporter
Displaying 10 items

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