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13_2_20cm_scaffold_1734

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1734_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(251..1633)
DNA (1383bp) protein (461aa)
pilR; transcriptional regulatory protein pilR; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pilR; regulator protein pilR; K02667 two-component system, NtrC family, response regulator PilR id=14625676 bin=bin7_NC10_sister species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pilR; transcriptional regulatory protein pilR
13_2_20cm_scaffold_1734_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1626..3248)
DNA (1623bp) protein (541aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor signal transduction histidine kinase id=14625675 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
Multi-sensor signal transduction histidine kinase
13_2_20cm_scaffold_1734_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3253..4455)
DNA (1203bp) protein (401aa)
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type 4 fimbrial assembly protein pilC id=4686861 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pilC; type 4 fimbrial assembly protein pilC
13_2_20cm_scaffold_1734_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4465..5589)
DNA (1125bp) protein (375aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Twitching motility protein id=3773050 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pilT2; twitching motility protein
13_2_20cm_scaffold_1734_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5620..7365)
DNA (1746bp) protein (582aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type IV-A pilus assembly ATPase PilB
13_2_20cm_scaffold_1734_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7372..7950)
DNA (579bp) protein (193aa)
Predicted phosphatase id=4311466 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase Tax=GWA2_Rokubacteria_73_35_curated
phosphatase
13_2_20cm_scaffold_1734_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(7905..8714)
DNA (810bp) protein (270aa)
protein mazG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein mazG id=4311465 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein mazG
Displaying 7 items

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