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13_2_20cm_scaffold_1797

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1797_1
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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1..2697
DNA (2697bp) protein (899aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0YA24_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB07858.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anop
13_2_20cm_scaffold_1797_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2862..3665
DNA (804bp) protein (268aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=GWA2_Rokubacteria_73_35_curated
ATP dependent helicase, Lhr family id=3307374 bin=GWA2_Methylomirabilis_73_35 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DEAD/H associated domain protein
13_2_20cm_scaffold_1797_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3678..4730
DNA (1053bp) protein (351aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
mreB; Rod shape-determining protein mreB id=14626892 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
mreB; Rod shape-determining protein mreB
13_2_20cm_scaffold_1797_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4737..5633)
DNA (897bp) protein (299aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3476529 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
13_2_20cm_scaffold_1797_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5675..6028)
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_scaffold_1797_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6281..7303
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIY5_CORCM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_1797_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7309..7731
DNA (423bp) protein (141aa)
id=14627948 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14627948 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_1797_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7743..8009
DNA (267bp) protein (89aa)
transcriptional regulator, AsnC family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4385649 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_1797_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8050..8997
DNA (948bp) protein (316aa)
3-beta hydroxysteroid dehydrogenase/isomerase family id=4900339 bin=GWA2_Methylomirabilis_73_35 species=Gloeocapsa sp. PCC 73106 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase Tax=GWA2_Rokubacteria_73_35_curated
NAD-dependent epimerase/dehydratase
13_2_20cm_scaffold_1797_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8994..9932
DNA (939bp) protein (313aa)
Putative 2-hydroxyacid dehydrogenase id=4900340 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=GWA2_Rokubacteria_73_35_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_2_20cm_scaffold_1797_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9936..10403
DNA (468bp) protein (156aa)
Pyridoxamine 5'-phosphate oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pyridoxamine 5''-phosphate oxidase id=4696791 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxamine 5'-phosphate oxidase
13_2_20cm_scaffold_1797_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(10817..11800)
DNA (984bp) protein (328aa)
Lactate dehydrogenase-related dehydrogenase (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-hydroxyacid dehydrogenase, putative id=2961537 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_1797_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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11834..12796
DNA (963bp) protein (321aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=3010429 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=GWC2_Rokubacteria_70_16_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_2_20cm_scaffold_1797_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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12798..13844
DNA (1047bp) protein (349aa)
alcohol dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alcohol dehydrogenase id=2961591 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
zinc-containing alcohol dehydrogenase superfamily protein
13_2_20cm_scaffold_1797_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13841..14578
DNA (738bp) protein (246aa)
nicotinamidase (EC:3.5.1.19)
bifunctional pyrazinamidase/nicotinamidase n=1 Tax=Variovorax paradoxus RepID=UPI0003730BBC
Variovorax paradoxus strain MEDvA23 contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36986.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
13_2_20cm_scaffold_1797_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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14644..15723
DNA (1080bp) protein (360aa)
putative ABC transporter periplasmic binding protein A; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate binding protein (Dipeptide) id=4626997 bin=GWF2_Methylomirabilis_70_14 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter periplasmic binding protein A
Displaying 16 items

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