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13_2_20cm_scaffold_1976

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1976_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..1203)
DNA (1203bp) protein (401aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycerol kinase id=4980423 bin=GWA2_Methylomirabilis_73_35 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerol kinase
13_2_20cm_scaffold_1976_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2045..2923)
DNA (879bp) protein (293aa)
ugpE2; sn-glycerol-3-phosphate transport system permease; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Binding-protein-dependent transport systems inner membrane component id=4980421 bin=GWA2_Methylomirabilis_73_35 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ugpE2; sn-glycerol-3-phosphate transport system permease
13_2_20cm_scaffold_1976_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2923..3804)
DNA (882bp) protein (294aa)
sn-glycerol-3-phosphate ABC transporter, permease protein id=4238986 bin=GWC2_Methylomirabilis_70_16 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sn-glycerol-3-phosphate transmembrane protein; K05814 sn-glycerol 3-phosphate transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type transporter, integral membrane subunit
13_2_20cm_scaffold_1976_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3826..5136)
DNA (1311bp) protein (437aa)
sn-glycerol 3-phosphate ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
ABC-type sugar transport system, periplasmic component id=4238985 bin=GWC2_Methylomirabilis_70_16 species=Grimontia sp. AK16 genus=Grimontia taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
extracellular solute-binding protein
13_2_20cm_scaffold_1976_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5213..5950)
DNA (738bp) protein (246aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=GWA2_Rokubacteria_73_35_curated
FAD dependent oxidoreductase id=3704571 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Glycerol-3-phosphate dehydrogenase
13_2_20cm_scaffold_1976_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6787..7602)
DNA (816bp) protein (272aa)
had-superfamily hydrolase, subfamily iia; K02566 NagD protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD-superfamily hydrolase, subfamily IIA id=3704568 bin=GWA2_Methylomirabilis_73_35 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
had-superfamily hydrolase, subfamily iia
13_2_20cm_scaffold_1976_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7612..9069)
DNA (1458bp) protein (486aa)
nuoN-1; NADH dehydrogenase I subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit N id=3704556 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nuoN-1; NADH dehydrogenase I subunit N
13_2_20cm_scaffold_1976_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9066..9188)
DNA (123bp) protein (41aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=GWA2_Rokubacteria_73_35_curated
Proton-translocating NADH-quinone oxidoreductase, chain M id=3704552 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1976_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9170..10510)
DNA (1341bp) protein (447aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADH dehydrogenase subunit M (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain M id=3704552 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1976_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10517..12388)
DNA (1872bp) protein (624aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14625912 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
13_2_20cm_scaffold_1976_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12395..13867
DNA (1473bp) protein (491aa)
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M23 id=4485944 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
peptidase M23
13_2_20cm_scaffold_1976_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13960..14625)
DNA (666bp) protein (222aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNA0_9EURY
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
13_2_20cm_scaffold_1976_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14650..15849)
DNA (1200bp) protein (400aa)
Electron transfer oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Electron transfer oxidoreductase id=14627395 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
monooxygenase FAD-binding protein
13_2_20cm_scaffold_1976_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15846..16541)
DNA (696bp) protein (232aa)
SAM-dependent methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type 11 methyltransferase id=14627396 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methyltransferase type 11
13_2_20cm_scaffold_1976_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16683..17372)
DNA (690bp) protein (230aa)
Chalcone and stilbene synthase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chalcone and stilbene synthase domain protein id=14627397 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Chalcone and stilbene synthase domain protein
Displaying 15 items

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