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13_2_20cm_scaffold_2074

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2074_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
hypothetical protein id=2773052 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_2074_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231..782)
DNA (552bp) protein (184aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX00824.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TetR family transcriptional regulator id=3428347 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TetR family transcriptional regulator
13_2_20cm_scaffold_2074_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(873..2477)
DNA (1605bp) protein (535aa)
putative thymidylate synthase (EC:2.1.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative thymidylate synthase (EC:2.1.1.-)
Thymidylate synthase complementing protein ThyX id=2773055 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_2074_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2514..2879)
DNA (366bp) protein (122aa)
cupin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cupin_2 domain containing protein id=2773060 bin=GWA2_Methylomirabilis_73_35 species=Pyrobaculum sp. 1860 genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cupin 2 protein
13_2_20cm_scaffold_2074_5
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3207..4130
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVU4_RHOSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABH00592.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
13_2_20cm_scaffold_2074_6
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4143..5195
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CD508
periplasmic binding protein/LacI transcriptional regulator
Tax=BJP_IG2157_Clostridiales_35_16
13_2_20cm_scaffold_2074_7
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5209..6468)
DNA (1260bp) protein (420aa)
glgB; 1,4-Alpha-glucan branching enzyme Tax=GWC2_Ignavibacteria_rel_36_12_curated
13_2_20cm_scaffold_2074_8
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

6812..7189
DNA (378bp) protein (126aa)
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Periplasmic solute binding protein id=4978630 bin=GWA2_Elusimicrobia_69_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC transporter periplasmic substrate binding protein
13_2_20cm_scaffold_2074_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7186..7650
DNA (465bp) protein (155aa)
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=CSP1_5_NC10
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein id=14429961 bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
periplasmic solute binding protein
13_2_20cm_scaffold_2074_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7927..8643
DNA (717bp) protein (239aa)
Luciferase-like, subgroup Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Luciferase family protein id=2817356 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_2074_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8762..9817
DNA (1056bp) protein (352aa)
Putative uncharacterized protein id=2773068 bin=GWA2_Methylomirabilis_73_35 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dihydroorotate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
dihydroorotate dehydrogenase
13_2_20cm_scaffold_2074_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9966..10727)
DNA (762bp) protein (254aa)
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter-like protein id=2817364 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
13_2_20cm_scaffold_2074_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10724..11731)
DNA (1008bp) protein (336aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Membrane lipoprotein lipid attachment site id=2817368 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter substrate-binding protein
13_2_20cm_scaffold_2074_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11742..12449)
DNA (708bp) protein (236aa)
hypothetical protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Abc transporter permease protein id=2817372 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
binding-protein-dependent transport systems inner membrane component
13_2_20cm_scaffold_2074_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12459..13487
DNA (1029bp) protein (343aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2817611 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_2074_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13484..14710
DNA (1227bp) protein (409aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] id=14626721 bin=bin7_NC10_sister species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
threonine synthase
13_2_20cm_scaffold_2074_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14726..15316
DNA (591bp) protein (197aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative 3-methyladenine DNA glycosylase id=2773084 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
DNA-3-methyladenine glycosylase
13_2_20cm_scaffold_2074_18
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15421..16395)
DNA (975bp) protein (325aa)
cation efflux family protein id=14632868 bin=bin9_gal15 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin9_gal15 organism_group=GAL15 rbh
cation efflux family protein Tax=CSP1_3_Armatimonadetes
cation efflux family protein
13_2_20cm_scaffold_2074_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16407..17180)
DNA (774bp) protein (258aa)
beta-lactamase domain-containing protein; K00784 ribonuclease Z [EC:3.1.26.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Beta-lactamase domain protein id=4489512 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase domain-containing protein
13_2_20cm_scaffold_2074_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17177..17935)
DNA (759bp) protein (253aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2773093 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2074_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17990..18700
DNA (711bp) protein (237aa)
tolQ; TolQ protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tolQ protein; K03562 biopolymer transport protein TolQ id=14626725 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
tolQ; TolQ protein
13_2_20cm_scaffold_2074_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18703..19131
DNA (429bp) protein (143aa)
tolR; protein TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tolR; protein TolR; K03560 biopolymer transport protein TolR id=14626726 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
protein TolR
13_2_20cm_scaffold_2074_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19153..19944
DNA (792bp) protein (264aa)
putative periplasmic protein TonB; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TonB family protein id=4034141 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic protein TonB
13_2_20cm_scaffold_2074_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20292..21233
DNA (942bp) protein (314aa)
tolB protein; K03641 TolB protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
WD40 domain-containing protein; K03641 TolB protein id=14626728 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
biopolymer transport TolB-like protein
13_2_20cm_scaffold_2074_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21285..21827
DNA (543bp) protein (181aa)
OmpA/MotB domain protein id=4034147 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptidoglycan-associated lipoprotein
13_2_20cm_scaffold_2074_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21860..22729
DNA (870bp) protein (290aa)
Uncharacterized protein id=4034149 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_2074_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22736..23086)
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4034151 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2074_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23444..23842
DNA (399bp) protein (133aa)
hypothetical protein; K07018 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07018 id=14626733 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
putative hydrolase of the alpha/beta superfamily
13_2_20cm_scaffold_2074_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23872..24474)
DNA (603bp) protein (201aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=14626734 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_2074_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24485..25204
DNA (720bp) protein (240aa)
oxidoreductase, short chain dehydrogenase/reductase family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=4034156 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 54 in total

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