ggKbase home page

13_2_20cm_scaffold_21311

Search features with annotation key words

Displaying 9 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_21311_1
unknown

Not on your lists

1..72
DNA (72bp) protein (24aa)

This feature has no annotations

13_2_20cm_scaffold_21311_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

287..1333
DNA (1047bp) protein (349aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-ketoacyl synthase id=3870372 bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-(ACP) synthase-like protein
13_2_20cm_scaffold_21311_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1415..2416
DNA (1002bp) protein (334aa)
Glycosyltransferase involved in cell wall biogenesis (EC:2.4.-.-)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyltransferase involved in cell wall biogenesis id=3870373 bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_21311_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3226..3609
DNA (384bp) protein (128aa)
monooxygenase FAD-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Monooxygenase FAD-binding protein id=3955053 bin=GWA2_Methylomirabilis_73_35 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
monooxygenase FAD-binding protein
13_2_20cm_scaffold_21311_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3603..4739
DNA (1137bp) protein (379aa)
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative ABC transporter permease protein id=3955116 bin=GWA2_Methylomirabilis_73_35 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type transport system, involved in lipoprotein release, permease component
13_2_20cm_scaffold_21311_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4747..5790
DNA (1044bp) protein (348aa)
ABC-type antimicrobial peptide transport system, ATPase component id=3955117 bin=GWA2_Methylomirabilis_73_35 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter
13_2_20cm_scaffold_21311_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5915..7543
DNA (1629bp) protein (543aa)
dolichol-phosphate mannosyltransferase-membrane bound sugar transferase involved in LPS biosynthesis (EC:2.4.1.83)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase id=3955120 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_21311_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7503..8243)
DNA (741bp) protein (247aa)
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Polysaccharide deacetylase id=3955121 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
polysaccharide deacetylase
13_2_20cm_scaffold_21311_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8240..9415)
DNA (1176bp) protein (392aa)
monogalactosyldiacylglycerol synthase; K03429 1,2-diacylglycerol 3-glucosyltransferase [EC:2.4.1.157] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Monogalactosyldiacylglycerol synthase id=3955122 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
monogalactosyldiacylglycerol synthase
Displaying 9 items

View Taxonomy