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13_2_20cm_scaffold_2203

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2203_1
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1110)
DNA (1110bp) protein (370aa)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) {ECO:0000313|EMBL:EGW19751.1}; EC=1.2.99.3 {ECO:0000313|EMBL:EGW19751.1};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methyl
aldehyde dehydrogenase (EC:1.2.99.3)
Aldehyde dehydrogenase (Pyrroloquinoline-quinone) n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1Z5_9GAMM
13_2_20cm_scaffold_2203_2
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1094..1546)
DNA (453bp) protein (151aa)
isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16)
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:AEK62117.1}; EC=1.3.99.16 {ECO:0000313|EMBL:AEK62117.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Isoquinoline 1-oxidoreductase alpha subunit n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A911_COLFT
13_2_20cm_scaffold_2203_3
unknown

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comp(1744..2169)
DNA (426bp) protein (142aa)

This feature has no annotations

13_2_20cm_scaffold_2203_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2262..3926)
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00036B33BF
Alcohol dehydrogenase PQQ-dependent, large subunit {ECO:0000313|EMBL:GAN76593.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera
alcohol dehydrogenase
13_2_20cm_scaffold_2203_5
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3988..4554)
DNA (567bp) protein (189aa)
Rieske iron-sulfur protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G3E8_9BRAD
rieske iron-sulfur protein
Rieske iron-sulfur protein {ECO:0000313|EMBL:BAL75285.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
13_2_20cm_scaffold_2203_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4854..5765
DNA (912bp) protein (304aa)
Putative Transposase related protein n=1 Tax=Candidatus Nitrospira defluvii PF52_9BACT">RepID=D8PF52_9BACT
putative transposase related protein (fragment)
Putative Transposase related protein {ECO:0000313|EMBL:CBK41861.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_scaffold_2203_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5891..6241)
DNA (351bp) protein (117aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=4815545 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2203_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6406..7158)
DNA (753bp) protein (251aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=GWA2_Rokubacteria_73_35_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=4815544 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2203_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7145..10351)
DNA (3207bp) protein (1069aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) id=14625178 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
13_2_20cm_scaffold_2203_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(10373..10639)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4530407 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2203_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10648..11772)
DNA (1125bp) protein (375aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) id=14625175 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5)
13_2_20cm_scaffold_2203_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11769..13043)
DNA (1275bp) protein (425aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase id=4530400 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_2203_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13040..13975)
DNA (936bp) protein (312aa)
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) id=14625173 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2)
13_2_20cm_scaffold_2203_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13978..14319)
DNA (342bp) protein (114aa)
PyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RI
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR id=4792710 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 14 items

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