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13_2_20cm_scaffold_21680

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_21680_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..863)
DNA (861bp) protein (287aa)
phosphoadenosine phosphosulfate reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoadenosine phosphosulfate reductase id=14626864 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phosphoadenosine phosphosulfate reductase
13_2_20cm_scaffold_21680_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(860..1060)
DNA (201bp) protein (67aa)
Putative Thiamine biosynthesis protein ThiS id=4492888 bin=GWA2_Methylomirabilis_73_35 species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K03154 sulfur carrier protein Tax=GWA2_Rokubacteria_73_35_curated
putative thiamine biosynthesis protein ThiS
13_2_20cm_scaffold_21680_3
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(1101..1646)
DNA (546bp) protein (182aa)
id=14626860 Tax=GWC2_ACD39_50_8_curated
id=14626860 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_21680_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1684..2478)
DNA (795bp) protein (265aa)
Putative uncharacterized protein id=3960150 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane anti-sigma factor Tax=GWA2_Rokubacteria_73_35_curated
anti-sigma-K factor RskA
13_2_20cm_scaffold_21680_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2475..3026)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated
putative RNA polymerase sigma factor, sigma-24-like protein
13_2_20cm_scaffold_21680_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3125..5110)
DNA (1986bp) protein (662aa)
Guanylate cyclase (Fragment) id=4492891 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium W5-15b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
family 3 adenylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_21680_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5308..6441)
DNA (1134bp) protein (378aa)
paaK; phenylacetate-CoA ligase Tax=GWA2_Rokubacteria_73_35_curated
Phenylacetate-CoA ligase id=4124058 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phenylacetate-CoA ligase
13_2_20cm_scaffold_21680_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6543..8033)
DNA (1491bp) protein (497aa)
Benzoate-CoA ligase family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMS4_9FIRM
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_2_20cm_scaffold_21680_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8142..8591)
DNA (450bp) protein (150aa)
enodribonuclease L-PSP n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262650F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
endoribonuclease
13_2_20cm_scaffold_21680_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8612..10030)
DNA (1419bp) protein (473aa)
boxB; benzoyl-CoA oxygenase component B; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Benzoyl-CoA oxygenase component B n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KA18_AZOSB
boxB; benzoyl-CoA oxygenase subunit B
13_2_20cm_scaffold_21680_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10030..10716)
DNA (687bp) protein (229aa)
hypothetical protein; K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] id=14627885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17)
13_2_20cm_scaffold_21680_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

11251..11424
DNA (174bp) protein (58aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_2_20cm_scaffold_21680_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11623..12129)
DNA (507bp) protein (169aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin id=14627886 bin=bin7_NC10_sister species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
13_2_20cm_scaffold_21680_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12126..13142)
DNA (1017bp) protein (339aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=14627887 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_2_20cm_scaffold_21680_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13243..14136)
DNA (894bp) protein (298aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-hydroxybenzoyl-CoA reductase subunit alpha id=4915860 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Displaying 15 items

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