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13_2_20cm_scaffold_3961

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3961_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..1141
DNA (1140bp) protein (380aa)
id=4736661 Tax=GWC2_Rokubacteria_70_16_curated
id=4736661 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_3961_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1138..1890
DNA (753bp) protein (251aa)
id=4614271 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4614271 Tax=GWC2_Rokubacteria_70_16_curated
13_2_20cm_scaffold_3961_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1916..2581
DNA (666bp) protein (222aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=24594421 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_2_20cm_scaffold_3961_4
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2616..4160)
DNA (1545bp) protein (515aa)
Patatin n=2 Tax=Nitrosococcus oceani RepID=Q3JCB3_NITOC rbh
patatin
Patatin {ECO:0000313|EMBL:KFI20033.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
13_2_20cm_scaffold_3961_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4257..4745)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Putative uncharacterized protein id=3408862 bin=GWC2_Elusimicrobia_64_44 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
13_2_20cm_scaffold_3961_6
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5183..5656)
DNA (474bp) protein (158aa)
Nitrilase/amidohydrolase superfamily protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A713_PELCD
nitrilase/amidohydrolase superfamily protein
Nitrilase/amidohydrolase superfamily protein {ECO:0000313|EMBL:ABA87838.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" sour
13_2_20cm_scaffold_3961_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6447..6716
DNA (270bp) protein (90aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histone family protein DNA-binding protein id=4863501 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histone family protein DNA-binding protein
13_2_20cm_scaffold_3961_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6766..7683
DNA (918bp) protein (306aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4) Tax=GWA2_Rokubacteria_70_23_curated
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase id=3222454 bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_3961_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7680..8333
DNA (654bp) protein (218aa)
haloacid dehalogenase (EC:3.8.1.2); K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=GWA2_Rokubacteria_70_23_curated
haloacid dehalogenase (EC:3.8.1.2)
Haloacid dehalogenase, type II id=4863507 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3961_10
unknown

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comp(8420..8494)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 10 items

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